Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.47■□□□□ 0.71
VCLP18206 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.47■□□□□ 0.71
VCLP18206 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.47■□□□□ 0.71
VCLP18206 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.47■□□□□ 0.71
VCLP18206 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.47■□□□□ 0.71
VCLP18206 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
VCLP18206 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 AL359736.2-201ENST00000621992 437 ntBASIC19.47■□□□□ 0.71
VCLP18206 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VCLP18206 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VCLP18206 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.47■□□□□ 0.71
VCLP18206 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.47■□□□□ 0.71
VCLP18206 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.46■□□□□ 0.71
VCLP18206 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
VCLP18206 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.46■□□□□ 0.71
VCLP18206 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 UBE2SP1-201ENST00000450587 669 ntBASIC19.46■□□□□ 0.71
VCLP18206 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.46■□□□□ 0.71
VCLP18206 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.46■□□□□ 0.71
VCLP18206 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.46■□□□□ 0.71
VCLP18206 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.46■□□□□ 0.71
VCLP18206 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
VCLP18206 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 PHGDH-210ENST00000641115 1638 ntBASIC19.46■□□□□ 0.71
VCLP18206 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCLP18206 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VCLP18206 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.45■□□□□ 0.7
VCLP18206 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCLP18206 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.45■□□□□ 0.7
VCLP18206 KRASP1-201ENST00000407852 552 ntBASIC19.45■□□□□ 0.7
VCLP18206 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 AC133681.1-201ENST00000465482 601 ntBASIC19.45■□□□□ 0.7
VCLP18206 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCLP18206 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
VCLP18206 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.45■□□□□ 0.7
VCLP18206 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.45■□□□□ 0.7
VCLP18206 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.45■□□□□ 0.7
VCLP18206 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.45■□□□□ 0.7
VCLP18206 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.45■□□□□ 0.7
VCLP18206 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCLP18206 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCLP18206 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VCLP18206 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VCLP18206 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VCLP18206 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.44■□□□□ 0.7
VCLP18206 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
VCLP18206 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.44■□□□□ 0.7
VCLP18206 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.44■□□□□ 0.7
VCLP18206 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
VCLP18206 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.44■□□□□ 0.7
VCLP18206 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 AC124016.1-201ENST00000609552 612 ntBASIC19.44■□□□□ 0.7
VCLP18206 AC110285.5-201ENST00000611501 352 ntBASIC19.44■□□□□ 0.7
VCLP18206 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VCLP18206 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 AC116351.2-201ENST00000606540 1585 ntBASIC19.44■□□□□ 0.7
VCLP18206 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
VCLP18206 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCLP18206 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VCLP18206 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VCLP18206 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms