Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AC007952.6-201ENST00000573168 2673 ntBASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AC003957.1-201ENST00000625108 2673 ntBASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 AC073508.3-201ENST00000619697 1419 ntBASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40ALP0C0E4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40ALP0C0E4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 FAM207BP-201ENST00000447172 505 ntBASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40ALP0C0E4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB40ALP0C0E4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB40ALP0C0E4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB40ALP0C0E4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.27■□□□□ 0.51
RAB40ALP0C0E4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
RAB40ALP0C0E4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AP005212.1-201ENST00000581547 1997 ntBASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 KRT18P57-201ENST00000443599 1254 ntBASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AL445228.2-201ENST00000605589 952 ntBASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AC096733.2-201ENST00000609937 1394 ntBASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40ALP0C0E4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 LIN28AP1-201ENST00000429574 405 ntBASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms