Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AP005242.2-201ENST00000580065 1175 ntBASIC21.86■■□□□ 1.09
CYP3A4P08684 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CYP3A4P08684 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.86■■□□□ 1.09
CYP3A4P08684 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CYP3A4P08684 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
CYP3A4P08684 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CYP3A4P08684 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CYP3A4P08684 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 MMP23A-201ENST00000234610 1017 ntBASIC21.85■■□□□ 1.09
CYP3A4P08684 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 FAM207BP-201ENST00000447172 505 ntBASIC21.85■■□□□ 1.09
CYP3A4P08684 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.85■■□□□ 1.09
CYP3A4P08684 SDHAP1-207ENST00000440850 2000 ntBASIC21.85■■□□□ 1.09
CYP3A4P08684 AC096733.2-201ENST00000609937 1394 ntBASIC21.85■■□□□ 1.09
CYP3A4P08684 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CYP3A4P08684 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.85■■□□□ 1.09
CYP3A4P08684 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 AL158211.5-201ENST00000623583 2518 ntBASIC21.84■■□□□ 1.09
CYP3A4P08684 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.84■■□□□ 1.09
CYP3A4P08684 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CYP3A4P08684 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.84■■□□□ 1.09
CYP3A4P08684 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.84■■□□□ 1.09
CYP3A4P08684 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.84■■□□□ 1.09
CYP3A4P08684 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.84■■□□□ 1.09
CYP3A4P08684 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.84■■□□□ 1.09
CYP3A4P08684 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.84■■□□□ 1.09
CYP3A4P08684 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CYP3A4P08684 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CYP3A4P08684 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CYP3A4P08684 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CYP3A4P08684 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.83■■□□□ 1.09
CYP3A4P08684 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.83■■□□□ 1.09
CYP3A4P08684 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CYP3A4P08684 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CYP3A4P08684 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.83■■□□□ 1.09
CYP3A4P08684 AC087499.1-201ENST00000418141 1075 ntBASIC21.83■■□□□ 1.09
CYP3A4P08684 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 AC097488.1-201ENST00000507834 756 ntBASIC21.83■■□□□ 1.09
CYP3A4P08684 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
CYP3A4P08684 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CYP3A4P08684 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.83■■□□□ 1.09
CYP3A4P08684 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CYP3A4P08684 Z82202.1-201ENST00000623446 1880 ntBASIC21.83■■□□□ 1.08
CYP3A4P08684 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CYP3A4P08684 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.83■■□□□ 1.08
CYP3A4P08684 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.82■■□□□ 1.08
CYP3A4P08684 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 MIR1238-201ENST00000408483 83 ntBASIC21.82■■□□□ 1.08
CYP3A4P08684 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.82■■□□□ 1.08
CYP3A4P08684 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.82■■□□□ 1.08
CYP3A4P08684 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.82■■□□□ 1.08
CYP3A4P08684 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.82■■□□□ 1.08
CYP3A4P08684 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.82■■□□□ 1.08
CYP3A4P08684 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.82■■□□□ 1.08
CYP3A4P08684 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CYP3A4P08684 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CYP3A4P08684 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.82■■□□□ 1.08
CYP3A4P08684 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.82■■□□□ 1.08
CYP3A4P08684 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.82■■□□□ 1.08
CYP3A4P08684 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms