Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RETP07949 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RETP07949 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RETP07949 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RETP07949 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RETP07949 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 HOMER2P1-201ENST00000455653 964 ntBASIC19.56■□□□□ 0.72
RETP07949 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RETP07949 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.56■□□□□ 0.72
RETP07949 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.56■□□□□ 0.72
RETP07949 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.56■□□□□ 0.72
RETP07949 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.56■□□□□ 0.72
RETP07949 AP000692.2-201ENST00000608391 879 ntBASIC19.56■□□□□ 0.72
RETP07949 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.56■□□□□ 0.72
RETP07949 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.56■□□□□ 0.72
RETP07949 AL031432.5-201ENST00000641059 760 ntBASIC19.56■□□□□ 0.72
RETP07949 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.56■□□□□ 0.72
RETP07949 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
RETP07949 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RETP07949 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RETP07949 AP006587.1-201ENST00000534129 1502 ntBASIC19.56■□□□□ 0.72
RETP07949 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.56■□□□□ 0.72
RETP07949 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RETP07949 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.55■□□□□ 0.72
RETP07949 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.55■□□□□ 0.72
RETP07949 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.55■□□□□ 0.72
RETP07949 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.55■□□□□ 0.72
RETP07949 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.55■□□□□ 0.72
RETP07949 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RETP07949 AC130371.2-201ENST00000619443 611 ntBASIC19.55■□□□□ 0.72
RETP07949 AC011558.1-201ENST00000623459 338 ntBASIC19.55■□□□□ 0.72
RETP07949 AC010653.2-201ENST00000623505 997 ntBASIC19.55■□□□□ 0.72
RETP07949 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RETP07949 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RETP07949 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RETP07949 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RETP07949 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.54■□□□□ 0.72
RETP07949 AC007225.1-201ENST00000566331 1836 ntBASIC19.54■□□□□ 0.72
RETP07949 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.54■□□□□ 0.72
RETP07949 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 SLC25A1P2-201ENST00000430693 912 ntBASIC19.54■□□□□ 0.72
RETP07949 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.54■□□□□ 0.72
RETP07949 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 AC141257.4-201ENST00000634557 245 ntBASIC19.54■□□□□ 0.72
RETP07949 AC136944.6-201ENST00000634818 245 ntBASIC19.54■□□□□ 0.72
RETP07949 MIR2861-201ENST00000636310 90 ntBASIC19.54■□□□□ 0.72
RETP07949 AC020907.5-201ENST00000624372 1936 ntBASIC19.54■□□□□ 0.72
RETP07949 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.54■□□□□ 0.72
RETP07949 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RETP07949 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RETP07949 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.54■□□□□ 0.72
RETP07949 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.53■□□□□ 0.72
RETP07949 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RETP07949 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RETP07949 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.53■□□□□ 0.72
RETP07949 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.53■□□□□ 0.72
RETP07949 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 KRT8P20-201ENST00000423953 1409 ntBASIC19.53■□□□□ 0.72
RETP07949 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RETP07949 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RETP07949 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RETP07949 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.53■□□□□ 0.72
RETP07949 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.53■□□□□ 0.72
RETP07949 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
RETP07949 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.53■□□□□ 0.72
RETP07949 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.53■□□□□ 0.72
RETP07949 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RETP07949 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RETP07949 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RETP07949 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RETP07949 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.52■□□□□ 0.72
RETP07949 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RETP07949 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms