Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.12■□□□□ 0.33
APOC1P02654 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.12■□□□□ 0.33
APOC1P02654 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
APOC1P02654 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APOC1P02654 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.12■□□□□ 0.33
APOC1P02654 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.12■□□□□ 0.33
APOC1P02654 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOC1P02654 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 TFP1-202ENST00000475455 1573 ntBASIC17.11■□□□□ 0.33
APOC1P02654 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.11■□□□□ 0.33
APOC1P02654 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.11■□□□□ 0.33
APOC1P02654 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 HLA-B-256ENST00000639848 1089 ntBASIC17.11■□□□□ 0.33
APOC1P02654 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APOC1P02654 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
APOC1P02654 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
APOC1P02654 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC1P02654 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
APOC1P02654 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 AC005332.7-201ENST00000614046 2005 ntBASIC17.1■□□□□ 0.33
APOC1P02654 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APOC1P02654 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.1■□□□□ 0.33
APOC1P02654 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.1■□□□□ 0.33
APOC1P02654 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.1■□□□□ 0.33
APOC1P02654 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.1■□□□□ 0.33
APOC1P02654 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.1■□□□□ 0.33
APOC1P02654 AC093484.2-201ENST00000580996 2166 ntBASIC17.1■□□□□ 0.33
APOC1P02654 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
APOC1P02654 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
APOC1P02654 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
APOC1P02654 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC1P02654 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.09■□□□□ 0.33
APOC1P02654 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.09■□□□□ 0.33
APOC1P02654 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.09■□□□□ 0.33
APOC1P02654 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.09■□□□□ 0.33
APOC1P02654 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.09■□□□□ 0.33
APOC1P02654 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.09■□□□□ 0.33
APOC1P02654 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.09■□□□□ 0.33
APOC1P02654 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 BX323043.1-201ENST00000641006 1765 ntBASIC17.09■□□□□ 0.33
APOC1P02654 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.09■□□□□ 0.33
APOC1P02654 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms