Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRUB2O95900 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.33■□□□□ 0.85
TRUB2O95900 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.33■□□□□ 0.85
TRUB2O95900 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRUB2O95900 AC008550.1-201ENST00000511500 884 ntBASIC20.33■□□□□ 0.85
TRUB2O95900 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRUB2O95900 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.33■□□□□ 0.85
TRUB2O95900 AC066615.1-201ENST00000640911 628 ntBASIC20.33■□□□□ 0.85
TRUB2O95900 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TRUB2O95900 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.33■□□□□ 0.84
TRUB2O95900 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.33■□□□□ 0.84
TRUB2O95900 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TRUB2O95900 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRUB2O95900 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRUB2O95900 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.32■□□□□ 0.84
TRUB2O95900 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.32■□□□□ 0.84
TRUB2O95900 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRUB2O95900 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.32■□□□□ 0.84
TRUB2O95900 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.32■□□□□ 0.84
TRUB2O95900 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.32■□□□□ 0.84
TRUB2O95900 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.32■□□□□ 0.84
TRUB2O95900 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.32■□□□□ 0.84
TRUB2O95900 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.32■□□□□ 0.84
TRUB2O95900 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRUB2O95900 AL032819.2-201ENST00000624543 2162 ntBASIC20.32■□□□□ 0.84
TRUB2O95900 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.32■□□□□ 0.84
TRUB2O95900 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRUB2O95900 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRUB2O95900 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRUB2O95900 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.31■□□□□ 0.84
TRUB2O95900 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.31■□□□□ 0.84
TRUB2O95900 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.31■□□□□ 0.84
TRUB2O95900 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRUB2O95900 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.31■□□□□ 0.84
TRUB2O95900 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRUB2O95900 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 AL135905.2-201ENST00000584934 1404 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRUB2O95900 RPS2P55-201ENST00000397318 883 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 AL353807.1-201ENST00000427475 662 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.3■□□□□ 0.84
TRUB2O95900 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.3■□□□□ 0.84
TRUB2O95900 AC107956.1-201ENST00000494359 873 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.3■□□□□ 0.84
TRUB2O95900 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
TRUB2O95900 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.3■□□□□ 0.84
TRUB2O95900 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 AF186192.3-201ENST00000583427 947 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.3■□□□□ 0.84
TRUB2O95900 Z99916.2-201ENST00000604037 246 ntBASIC20.3■□□□□ 0.84
TRUB2O95900 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRUB2O95900 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.3■□□□□ 0.84
TRUB2O95900 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
TRUB2O95900 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.3■□□□□ 0.84
TRUB2O95900 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRUB2O95900 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRUB2O95900 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms