Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC104417.2-201ENST00000562989 1793 ntBASIC22.55■■□□□ 1.2
CDKL5O76039 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDKL5O76039 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.55■■□□□ 1.2
CDKL5O76039 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDKL5O76039 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.54■■□□□ 1.2
CDKL5O76039 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 KRASP1-201ENST00000407852 552 ntBASIC22.54■■□□□ 1.2
CDKL5O76039 POU5F1P3-201ENST00000428824 1078 ntBASIC22.54■■□□□ 1.2
CDKL5O76039 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.54■■□□□ 1.2
CDKL5O76039 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.54■■□□□ 1.2
CDKL5O76039 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDKL5O76039 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.54■■□□□ 1.2
CDKL5O76039 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.54■■□□□ 1.2
CDKL5O76039 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.54■■□□□ 1.2
CDKL5O76039 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKL5O76039 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.53■■□□□ 1.2
CDKL5O76039 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.53■■□□□ 1.2
CDKL5O76039 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.53■■□□□ 1.2
CDKL5O76039 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.53■■□□□ 1.2
CDKL5O76039 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
CDKL5O76039 C1QL1P1-201ENST00000568105 661 ntBASIC22.53■■□□□ 1.2
CDKL5O76039 RN7SL471P-201ENST00000580476 299 ntBASIC22.53■■□□□ 1.2
CDKL5O76039 MIR4651-201ENST00000582622 73 ntBASIC22.53■■□□□ 1.2
CDKL5O76039 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDKL5O76039 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.53■■□□□ 1.2
CDKL5O76039 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDKL5O76039 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.53■■□□□ 1.2
CDKL5O76039 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CDKL5O76039 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.53■■□□□ 1.2
CDKL5O76039 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDKL5O76039 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDKL5O76039 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDKL5O76039 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.52■■□□□ 1.2
CDKL5O76039 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.52■■□□□ 1.2
CDKL5O76039 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CDKL5O76039 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CDKL5O76039 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.52■■□□□ 1.2
CDKL5O76039 AC133681.1-201ENST00000465482 601 ntBASIC22.52■■□□□ 1.2
CDKL5O76039 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.52■■□□□ 1.2
CDKL5O76039 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.52■■□□□ 1.2
CDKL5O76039 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDKL5O76039 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDKL5O76039 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.52■■□□□ 1.2
CDKL5O76039 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CDKL5O76039 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 AC128676.1-201ENST00000454392 318 ntBASIC22.51■■□□□ 1.19
CDKL5O76039 KRT16P5-201ENST00000455284 522 ntBASIC22.51■■□□□ 1.19
CDKL5O76039 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CDKL5O76039 AC124016.1-201ENST00000609552 612 ntBASIC22.51■■□□□ 1.19
CDKL5O76039 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.51■■□□□ 1.19
CDKL5O76039 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDKL5O76039 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDKL5O76039 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.5■■□□□ 1.19
CDKL5O76039 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.5■■□□□ 1.19
CDKL5O76039 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CDKL5O76039 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDKL5O76039 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDKL5O76039 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CDKL5O76039 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms