Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HO75486 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HO75486 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUPT3HO75486 AC124283.5-201ENST00000624661 1809 ntBASIC19.18■□□□□ 0.66
SUPT3HO75486 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HO75486 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.18■□□□□ 0.66
SUPT3HO75486 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.18■□□□□ 0.66
SUPT3HO75486 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SUPT3HO75486 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SUPT3HO75486 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HO75486 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SUPT3HO75486 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.18■□□□□ 0.66
SUPT3HO75486 MIR4758-201ENST00000577688 71 ntBASIC19.18■□□□□ 0.66
SUPT3HO75486 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.18■□□□□ 0.66
SUPT3HO75486 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.18■□□□□ 0.66
SUPT3HO75486 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HO75486 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HO75486 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HO75486 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HO75486 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.17■□□□□ 0.66
SUPT3HO75486 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.17■□□□□ 0.66
SUPT3HO75486 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.17■□□□□ 0.66
SUPT3HO75486 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.17■□□□□ 0.66
SUPT3HO75486 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HO75486 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HO75486 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HO75486 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 AC092368.3-202ENST00000574180 1591 ntBASIC19.16■□□□□ 0.66
SUPT3HO75486 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HO75486 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.16■□□□□ 0.66
SUPT3HO75486 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.16■□□□□ 0.66
SUPT3HO75486 RPS2P52-201ENST00000469610 820 ntBASIC19.16■□□□□ 0.66
SUPT3HO75486 AC097658.1-201ENST00000475555 843 ntBASIC19.16■□□□□ 0.66
SUPT3HO75486 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.16■□□□□ 0.66
SUPT3HO75486 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HO75486 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.15■□□□□ 0.66
SUPT3HO75486 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SUPT3HO75486 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.15■□□□□ 0.66
SUPT3HO75486 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SUPT3HO75486 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.15■□□□□ 0.66
SUPT3HO75486 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.15■□□□□ 0.66
SUPT3HO75486 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.15■□□□□ 0.66
SUPT3HO75486 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SUPT3HO75486 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.15■□□□□ 0.66
SUPT3HO75486 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SUPT3HO75486 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms