Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 AC008550.1-201ENST00000511500 884 ntBASIC18.06■□□□□ 0.48
TRIM3O75382 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM3O75382 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 HCG11-201ENST00000411553 5696 ntBASIC18.06■□□□□ 0.48
TRIM3O75382 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM3O75382 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM3O75382 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM3O75382 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM3O75382 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM3O75382 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM3O75382 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 AC116351.2-201ENST00000606540 1585 ntBASIC18.05■□□□□ 0.48
TRIM3O75382 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM3O75382 TNXA-203ENST00000507684 2038 ntBASIC18.05■□□□□ 0.48
TRIM3O75382 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM3O75382 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM3O75382 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 NBPF21P-201ENST00000425093 1451 ntBASIC18.05■□□□□ 0.48
TRIM3O75382 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM3O75382 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM3O75382 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM3O75382 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM3O75382 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM3O75382 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRIM3O75382 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM3O75382 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM3O75382 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM3O75382 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM3O75382 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM3O75382 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM3O75382 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM3O75382 PCDHAC2-203ENST00000615316 3011 ntBASIC18.04■□□□□ 0.48
TRIM3O75382 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 RPS2P4-201ENST00000476944 856 ntBASIC18.03■□□□□ 0.48
TRIM3O75382 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRIM3O75382 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.03■□□□□ 0.48
TRIM3O75382 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 TCF3P1-201ENST00000423021 1937 ntBASIC18.03■□□□□ 0.48
TRIM3O75382 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM3O75382 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM3O75382 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM3O75382 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM3O75382 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM3O75382 AC112907.3-201ENST00000577781 2400 ntBASIC18.02■□□□□ 0.48
TRIM3O75382 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms