Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF2O60811 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.22■□□□□ 0.51
PRAMEF2O60811 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF2O60811 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF2O60811 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PRAMEF2O60811 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF2O60811 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF2O60811 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 AC026471.5-201ENST00000615068 467 ntBASIC18.21■□□□□ 0.51
PRAMEF2O60811 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 TREX1-205ENST00000625293 1783 ntBASIC18.21■□□□□ 0.51
PRAMEF2O60811 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF2O60811 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF2O60811 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PRAMEF2O60811 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 TUBB8P6-201ENST00000436895 1288 ntBASIC18.2■□□□□ 0.5
PRAMEF2O60811 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 KRT18P16-201ENST00000510337 1294 ntBASIC18.2■□□□□ 0.5
PRAMEF2O60811 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF2O60811 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF2O60811 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 AL355355.2-201ENST00000442321 338 ntBASIC18.19■□□□□ 0.5
PRAMEF2O60811 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 AL355075.4-201ENST00000554988 638 ntBASIC18.19■□□□□ 0.5
PRAMEF2O60811 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CD177P1-201ENST00000606252 935 ntBASIC18.19■□□□□ 0.5
PRAMEF2O60811 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF2O60811 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF2O60811 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF2O60811 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEF2O60811 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms