Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20■□□□□ 0.79
TSPAN3O60637 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
TSPAN3O60637 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20■□□□□ 0.79
TSPAN3O60637 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20■□□□□ 0.79
TSPAN3O60637 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN3O60637 NME1-207ENST00000480143 964 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN3O60637 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN3O60637 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TSPAN3O60637 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN3O60637 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20■□□□□ 0.79
TSPAN3O60637 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20■□□□□ 0.79
TSPAN3O60637 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TSPAN3O60637 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN3O60637 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN3O60637 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN3O60637 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN3O60637 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 FAM210CP-201ENST00000445714 574 ntBASIC19.99■□□□□ 0.79
TSPAN3O60637 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN3O60637 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.99■□□□□ 0.79
TSPAN3O60637 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.99■□□□□ 0.79
TSPAN3O60637 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN3O60637 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN3O60637 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN3O60637 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TSPAN3O60637 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TSPAN3O60637 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TSPAN3O60637 AC008040.2-201ENST00000461049 708 ntBASIC19.98■□□□□ 0.79
TSPAN3O60637 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TSPAN3O60637 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 AC026271.3-201ENST00000571884 352 ntBASIC19.98■□□□□ 0.79
TSPAN3O60637 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TSPAN3O60637 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN3O60637 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TSPAN3O60637 RCC2P6-201ENST00000526625 1557 ntBASIC19.98■□□□□ 0.79
TSPAN3O60637 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.98■□□□□ 0.79
TSPAN3O60637 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN3O60637 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN3O60637 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.97■□□□□ 0.79
TSPAN3O60637 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TSPAN3O60637 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 AL160286.2-201ENST00000567150 934 ntBASIC19.97■□□□□ 0.79
TSPAN3O60637 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.97■□□□□ 0.79
TSPAN3O60637 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 AC011298.2-201ENST00000617989 482 ntBASIC19.97■□□□□ 0.79
TSPAN3O60637 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TSPAN3O60637 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN3O60637 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
TSPAN3O60637 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN3O60637 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms