Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 TMEM179-206ENST00000616017 1645 ntBASIC18.67■□□□□ 0.58
SLC28A2O43868 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC28A2O43868 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 DUX4L26-201ENST00000489078 1255 ntBASIC18.66■□□□□ 0.58
SLC28A2O43868 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC28A2O43868 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC28A2O43868 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 LINC01568-207ENST00000641790 1380 ntBASIC18.66■□□□□ 0.58
SLC28A2O43868 RNF165-205ENST00000588679 2904 ntBASIC18.66■□□□□ 0.58
SLC28A2O43868 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC28A2O43868 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC28A2O43868 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC28A2O43868 AC125437.2-201ENST00000625180 2167 ntBASIC18.65■□□□□ 0.58
SLC28A2O43868 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.65■□□□□ 0.58
SLC28A2O43868 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC28A2O43868 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC28A2O43868 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC28A2O43868 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC28A2O43868 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC28A2O43868 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC28A2O43868 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC28A2O43868 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC28A2O43868 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC28A2O43868 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC28A2O43868 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.64■□□□□ 0.58
SLC28A2O43868 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC28A2O43868 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC28A2O43868 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SLC28A2O43868 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC28A2O43868 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 TERF1P1-201ENST00000311003 1181 ntBASIC18.64■□□□□ 0.57
SLC28A2O43868 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC28A2O43868 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC28A2O43868 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC28A2O43868 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC28A2O43868 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC28A2O43868 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC28A2O43868 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC28A2O43868 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC28A2O43868 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC28A2O43868 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC28A2O43868 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 AL158211.5-201ENST00000623583 2518 ntBASIC18.63■□□□□ 0.57
SLC28A2O43868 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC28A2O43868 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC28A2O43868 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC28A2O43868 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC28A2O43868 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 UPK3BP1-201ENST00000428678 509 ntBASIC18.63■□□□□ 0.57
SLC28A2O43868 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC28A2O43868 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC28A2O43868 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC28A2O43868 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A2O43868 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A2O43868 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms