Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SSNA1O43805 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SSNA1O43805 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.52■□□□□ 0.23
SSNA1O43805 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SSNA1O43805 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SSNA1O43805 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.52■□□□□ 0.23
SSNA1O43805 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.52■□□□□ 0.23
SSNA1O43805 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SSNA1O43805 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.52■□□□□ 0.23
SSNA1O43805 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSNA1O43805 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
SSNA1O43805 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.51■□□□□ 0.23
SSNA1O43805 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SSNA1O43805 MKRN4P-201ENST00000444706 1521 ntBASIC16.51■□□□□ 0.23
SSNA1O43805 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SSNA1O43805 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.51■□□□□ 0.23
SSNA1O43805 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.51■□□□□ 0.23
SSNA1O43805 AC092171.4-201ENST00000609130 632 ntBASIC16.51■□□□□ 0.23
SSNA1O43805 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.51■□□□□ 0.23
SSNA1O43805 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SSNA1O43805 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.51■□□□□ 0.23
SSNA1O43805 Z98044.1-201ENST00000632503 1764 ntBASIC16.51■□□□□ 0.23
SSNA1O43805 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSNA1O43805 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSNA1O43805 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SSNA1O43805 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SSNA1O43805 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.5■□□□□ 0.23
SSNA1O43805 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.5■□□□□ 0.23
SSNA1O43805 AC245052.3-201ENST00000450182 901 ntBASIC16.5■□□□□ 0.23
SSNA1O43805 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.5■□□□□ 0.23
SSNA1O43805 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 AL031598.1-201ENST00000561511 1773 ntBASIC16.5■□□□□ 0.23
SSNA1O43805 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.5■□□□□ 0.23
SSNA1O43805 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SSNA1O43805 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.5■□□□□ 0.23
SSNA1O43805 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SSNA1O43805 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSNA1O43805 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
SSNA1O43805 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SSNA1O43805 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.49■□□□□ 0.23
SSNA1O43805 SLC47A1P1-202ENST00000449666 945 ntBASIC16.49■□□□□ 0.23
SSNA1O43805 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.49■□□□□ 0.23
SSNA1O43805 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
SSNA1O43805 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.49■□□□□ 0.23
SSNA1O43805 MIR4787-201ENST00000607364 84 ntBASIC16.49■□□□□ 0.23
SSNA1O43805 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.49■□□□□ 0.23
SSNA1O43805 RARRES2P11-201ENST00000635158 484 ntBASIC16.49■□□□□ 0.23
SSNA1O43805 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSNA1O43805 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSNA1O43805 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSNA1O43805 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SSNA1O43805 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms