Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 AC091390.4-202ENST00000476426 537 ntBASIC19.63■□□□□ 0.73
SMAD6O43541 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.63■□□□□ 0.73
SMAD6O43541 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.63■□□□□ 0.73
SMAD6O43541 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 SLC25A24-204ENST00000569674 2357 ntBASIC19.63■□□□□ 0.73
SMAD6O43541 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.63■□□□□ 0.73
SMAD6O43541 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.63■□□□□ 0.73
SMAD6O43541 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.62■□□□□ 0.73
SMAD6O43541 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.62■□□□□ 0.73
SMAD6O43541 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.62■□□□□ 0.73
SMAD6O43541 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.62■□□□□ 0.73
SMAD6O43541 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.62■□□□□ 0.73
SMAD6O43541 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
SMAD6O43541 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SMAD6O43541 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.62■□□□□ 0.73
SMAD6O43541 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
SMAD6O43541 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD6O43541 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD6O43541 KRT8P41-201ENST00000533985 1514 ntBASIC19.61■□□□□ 0.73
SMAD6O43541 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SMAD6O43541 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.61■□□□□ 0.73
SMAD6O43541 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.61■□□□□ 0.73
SMAD6O43541 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
SMAD6O43541 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.61■□□□□ 0.73
SMAD6O43541 FITM1-202ENST00000559294 800 ntBASIC19.61■□□□□ 0.73
SMAD6O43541 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.61■□□□□ 0.73
SMAD6O43541 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD6O43541 AC104417.2-201ENST00000562989 1793 ntBASIC19.61■□□□□ 0.73
SMAD6O43541 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.61■□□□□ 0.73
SMAD6O43541 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD6O43541 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SMAD6O43541 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 AL158211.5-201ENST00000623583 2518 ntBASIC19.6■□□□□ 0.73
SMAD6O43541 ZNF815P-204ENST00000434898 1737 ntBASIC19.6■□□□□ 0.73
SMAD6O43541 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.6■□□□□ 0.73
SMAD6O43541 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.6■□□□□ 0.73
SMAD6O43541 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.6■□□□□ 0.73
SMAD6O43541 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.6■□□□□ 0.73
SMAD6O43541 AC133561.5-201ENST00000635547 218 ntBASIC19.6■□□□□ 0.73
SMAD6O43541 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SMAD6O43541 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.6■□□□□ 0.73
SMAD6O43541 CYP2D8P-201ENST00000433633 1490 ntBASIC19.6■□□□□ 0.73
SMAD6O43541 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD6O43541 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMAD6O43541 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms