Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COCHO43405 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.07■□□□□ 0.8
COCHO43405 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 INGX-201ENST00000359239 846 ntBASIC20.07■□□□□ 0.8
COCHO43405 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 AC113347.1-201ENST00000413321 391 ntBASIC20.07■□□□□ 0.8
COCHO43405 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.07■□□□□ 0.8
COCHO43405 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.07■□□□□ 0.8
COCHO43405 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.07■□□□□ 0.8
COCHO43405 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.07■□□□□ 0.8
COCHO43405 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COCHO43405 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COCHO43405 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COCHO43405 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.06■□□□□ 0.8
COCHO43405 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.06■□□□□ 0.8
COCHO43405 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
COCHO43405 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 MIR1224-201ENST00000408193 85 ntBASIC20.06■□□□□ 0.8
COCHO43405 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 TMPOP1-202ENST00000424642 1267 ntBASIC20.06■□□□□ 0.8
COCHO43405 SLC25A3P1-201ENST00000443844 931 ntBASIC20.06■□□□□ 0.8
COCHO43405 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.06■□□□□ 0.8
COCHO43405 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COCHO43405 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
COCHO43405 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 ECEL1P2-202ENST00000465689 757 ntBASIC20.05■□□□□ 0.8
COCHO43405 AC092865.7-201ENST00000641832 219 ntBASIC20.05■□□□□ 0.8
COCHO43405 AC104417.2-201ENST00000562989 1793 ntBASIC20.05■□□□□ 0.8
COCHO43405 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COCHO43405 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.05■□□□□ 0.8
COCHO43405 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COCHO43405 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 TERF1P1-201ENST00000311003 1181 ntBASIC20.04■□□□□ 0.8
COCHO43405 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.04■□□□□ 0.8
COCHO43405 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 AC010331.1-201ENST00000611423 582 ntBASIC20.04■□□□□ 0.8
COCHO43405 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.04■□□□□ 0.8
COCHO43405 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.04■□□□□ 0.8
COCHO43405 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COCHO43405 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COCHO43405 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COCHO43405 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COCHO43405 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms