Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 MIR718-201ENST00000390190 70 ntBASIC17.87■□□□□ 0.45
TO15178 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.87■□□□□ 0.45
TO15178 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.87■□□□□ 0.45
TO15178 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.87■□□□□ 0.45
TO15178 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TO15178 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TO15178 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TO15178 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TO15178 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TO15178 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TO15178 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TO15178 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.86■□□□□ 0.45
TO15178 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 RPS2P4-201ENST00000476944 856 ntBASIC17.86■□□□□ 0.45
TO15178 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.86■□□□□ 0.45
TO15178 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 Z99916.2-201ENST00000604037 246 ntBASIC17.86■□□□□ 0.45
TO15178 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.86■□□□□ 0.45
TO15178 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.86■□□□□ 0.45
TO15178 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TO15178 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.86■□□□□ 0.45
TO15178 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TO15178 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.86■□□□□ 0.45
TO15178 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TO15178 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TO15178 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.86■□□□□ 0.45
TO15178 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
TO15178 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.85■□□□□ 0.45
TO15178 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TO15178 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TO15178 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.85■□□□□ 0.45
TO15178 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.85■□□□□ 0.45
TO15178 KRT16P1-201ENST00000399124 1418 ntBASIC17.85■□□□□ 0.45
TO15178 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TO15178 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.85■□□□□ 0.45
TO15178 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.85■□□□□ 0.45
TO15178 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.85■□□□□ 0.45
TO15178 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.85■□□□□ 0.45
TO15178 AL160286.2-201ENST00000567150 934 ntBASIC17.85■□□□□ 0.45
TO15178 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TO15178 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.84■□□□□ 0.45
TO15178 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
TO15178 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
TO15178 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TO15178 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.84■□□□□ 0.45
TO15178 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.84■□□□□ 0.45
TO15178 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 AC004980.1-204ENST00000429707 299 ntBASIC17.84■□□□□ 0.45
TO15178 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.84■□□□□ 0.45
TO15178 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.84■□□□□ 0.45
TO15178 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TO15178 AC026271.3-201ENST00000571884 352 ntBASIC17.84■□□□□ 0.45
TO15178 AC131212.4-201ENST00000623606 975 ntBASIC17.84■□□□□ 0.45
TO15178 AL049637.2-201ENST00000641778 930 ntBASIC17.84■□□□□ 0.45
TO15178 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TO15178 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TO15178 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms