Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK2O00526 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.55■□□□□ 0.08
UPK2O00526 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 MYC-209ENST00000641252 345 ntBASIC15.55■□□□□ 0.08
UPK2O00526 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UPK2O00526 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK2O00526 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
UPK2O00526 KRT8P8-201ENST00000434750 1448 ntBASIC15.54■□□□□ 0.08
UPK2O00526 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.54■□□□□ 0.08
UPK2O00526 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.54■□□□□ 0.08
UPK2O00526 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK2O00526 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK2O00526 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK2O00526 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.53■□□□□ 0.08
UPK2O00526 PNMA6B-201ENST00000538162 1200 ntBASIC15.53■□□□□ 0.08
UPK2O00526 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 AC060766.5-201ENST00000590539 871 ntBASIC15.53■□□□□ 0.08
UPK2O00526 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.53■□□□□ 0.08
UPK2O00526 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK2O00526 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK2O00526 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK2O00526 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
UPK2O00526 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK2O00526 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK2O00526 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK2O00526 AC104417.2-201ENST00000562989 1793 ntBASIC15.52■□□□□ 0.08
UPK2O00526 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
UPK2O00526 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms