Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 AC079598.2-202ENST00000546624 1451 ntBASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPA2E9PIF3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 YBX1P10-201ENST00000444752 975 ntBASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 C1QL1P1-201ENST00000568105 661 ntBASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPA2E9PIF3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 AP001271.2-201ENST00000624018 1556 ntBASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 AC012306.2-201ENST00000609350 630 ntBASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA2E9PIF3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 AL031985.4-201ENST00000642138 673 ntBASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA2E9PIF3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NPIPA2E9PIF3 KRT8P9-201ENST00000558927 1449 ntBASIC17.64■□□□□ 0.42
NPIPA2E9PIF3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms