Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFAP99D6REC4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CFAP99D6REC4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CFAP99D6REC4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CFAP99D6REC4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 KRT16P5-201ENST00000455284 522 ntBASIC19.33■□□□□ 0.68
CFAP99D6REC4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.33■□□□□ 0.68
CFAP99D6REC4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.33■□□□□ 0.68
CFAP99D6REC4 TMEM191A-211ENST00000637163 1067 ntBASIC19.33■□□□□ 0.68
CFAP99D6REC4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.33■□□□□ 0.68
CFAP99D6REC4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFAP99D6REC4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
CFAP99D6REC4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
CFAP99D6REC4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 AC142381.4-202ENST00000563973 229 ntBASIC19.32■□□□□ 0.68
CFAP99D6REC4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.32■□□□□ 0.68
CFAP99D6REC4 AL359736.2-201ENST00000621992 437 ntBASIC19.32■□□□□ 0.68
CFAP99D6REC4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFAP99D6REC4 KRT8P8-201ENST00000434750 1448 ntBASIC19.32■□□□□ 0.68
CFAP99D6REC4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 AC138932.1-201ENST00000534164 6830 ntBASIC19.31■□□□□ 0.68
CFAP99D6REC4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CFAP99D6REC4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CFAP99D6REC4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.3■□□□□ 0.68
CFAP99D6REC4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP99D6REC4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP99D6REC4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms