Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.98■□□□□ 0.63
C4orf47A7E2U8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.98■□□□□ 0.63
C4orf47A7E2U8 FDX1P1-201ENST00000449115 551 ntBASIC18.98■□□□□ 0.63
C4orf47A7E2U8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 AP003041.3-201ENST00000527151 707 ntBASIC18.98■□□□□ 0.63
C4orf47A7E2U8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C4orf47A7E2U8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AP000347.1-202ENST00000435868 847 ntBASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 CA15P1-201ENST00000481698 905 ntBASIC18.97■□□□□ 0.63
C4orf47A7E2U8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 KRT8P45-201ENST00000414328 1447 ntBASIC18.97■□□□□ 0.63
C4orf47A7E2U8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C4orf47A7E2U8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 DPP3P2-201ENST00000416030 1696 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 AL845331.1-201ENST00000424978 1190 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 PVRIG2P-201ENST00000435460 978 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 PRELID1P1-202ENST00000567272 903 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 MIR3652-201ENST00000579335 131 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 AC092119.3-201ENST00000612618 583 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 LINC01311-201ENST00000565162 1445 ntBASIC18.96■□□□□ 0.63
C4orf47A7E2U8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C4orf47A7E2U8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf47A7E2U8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms