Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC01548A6NM66 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01548A6NM66 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 KRT16P1-201ENST00000399124 1418 ntBASIC15.31■□□□□ 0.04
LINC01548A6NM66 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LINC01548A6NM66 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01548A6NM66 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 AC004980.1-204ENST00000429707 299 ntBASIC15.3■□□□□ 0.04
LINC01548A6NM66 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 AC026471.5-201ENST00000615068 467 ntBASIC15.3■□□□□ 0.04
LINC01548A6NM66 AL445675.2-201ENST00000620291 557 ntBASIC15.3■□□□□ 0.04
LINC01548A6NM66 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01548A6NM66 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC01548A6NM66 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.29■□□□□ 0.04
LINC01548A6NM66 AL355355.2-201ENST00000442321 338 ntBASIC15.29■□□□□ 0.04
LINC01548A6NM66 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 AP003071.4-201ENST00000562276 1284 ntBASIC15.29■□□□□ 0.04
LINC01548A6NM66 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.29■□□□□ 0.04
LINC01548A6NM66 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms