Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 AC004408.2-201ENST00000623613 2777 ntBASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBAL3A6NHL2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TUBAL3A6NHL2 AL049796.1-201ENST00000565336 1766 ntBASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 PCDHAC2-203ENST00000615316 3011 ntBASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 AC012306.2-201ENST00000609350 630 ntBASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBAL3A6NHL2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.38
TUBAL3A6NHL2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TUBAL3A6NHL2 KRT8P20-201ENST00000423953 1409 ntBASIC17.39■□□□□ 0.38
TUBAL3A6NHL2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.39■□□□□ 0.38
TUBAL3A6NHL2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 AL353708.3-201ENST00000610272 989 ntBASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBAL3A6NHL2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBAL3A6NHL2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms