Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
MBD3L3A6NE82 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD3L3A6NE82 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 KRT8P11-201ENST00000409686 1436 ntBASIC17.05■□□□□ 0.32
MBD3L3A6NE82 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 AL138966.2-201ENST00000621997 464 ntBASIC17.05■□□□□ 0.32
MBD3L3A6NE82 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L3A6NE82 AC104417.2-201ENST00000562989 1793 ntBASIC17.05■□□□□ 0.32
MBD3L3A6NE82 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ARMC10P1-201ENST00000313754 855 ntBASIC17.04■□□□□ 0.32
MBD3L3A6NE82 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 AL512604.3-201ENST00000569583 964 ntBASIC17.04■□□□□ 0.32
MBD3L3A6NE82 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 ZNF815P-204ENST00000434898 1737 ntBASIC17.04■□□□□ 0.32
MBD3L3A6NE82 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L3A6NE82 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 AL157384.1-201ENST00000445995 2473 ntBASIC17.03■□□□□ 0.32
MBD3L3A6NE82 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MBD3L3A6NE82 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L3A6NE82 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L3A6NE82 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms