Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 TSPY17P-201ENST00000450329 467 ntBASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D3BA6NDS4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 AC092338.2-201ENST00000568827 1415 ntBASIC19.68■□□□□ 0.74
TBC1D3BA6NDS4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 AL023803.3-201ENST00000615559 522 ntBASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D3BA6NDS4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AC092667.1-201ENST00000434301 2586 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AL353719.1-201ENST00000566847 864 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 LINC01238-205ENST00000567549 1107 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AC139887.4-201ENST00000607877 719 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AL138966.2-201ENST00000621997 464 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 KRT8P41-201ENST00000533985 1514 ntBASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D3BA6NDS4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 AC117947.1-201ENST00000427448 529 ntBASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D3BA6NDS4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms