Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL135905.2-201ENST00000584934 1404 ntBASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AP000974.1-201ENST00000623909 2387 ntBASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RPS2P55-201ENST00000397318 883 ntBASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC107956.1-201ENST00000494359 873 ntBASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL121829.2-201ENST00000620908 328 ntBASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC012618.2-201ENST00000428058 849 ntBASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL121906.2-201ENST00000621597 723 ntBASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms