Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 POU5F1P3-201ENST00000428824 1078 ntBASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRBV7-1A0A0A6YYK4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRBV7-1A0A0A6YYK4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV7-1A0A0A6YYK4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRBV7-1A0A0A6YYK4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRBV7-1A0A0A6YYK4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
TRBV7-1A0A0A6YYK4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 KRASP1-201ENST00000407852 552 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 KRT16P5-201ENST00000455284 522 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 FAM201B-201ENST00000458407 597 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 RN7SL471P-201ENST00000580476 299 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 AL023875.1-201ENST00000640777 796 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 AC073648.6-201ENST00000641589 218 ntBASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRBV7-1A0A0A6YYK4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 AL032819.2-201ENST00000624543 2162 ntBASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 AC133681.1-201ENST00000465482 601 ntBASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 AC233263.1-201ENST00000578059 224 ntBASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 AC110285.5-201ENST00000611501 352 ntBASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV7-1A0A0A6YYK4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRBV7-1A0A0A6YYK4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV7-1A0A0A6YYK4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms