Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PRMT5P1-201ENST00000514351 598 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 Y_RNA.668-201ENST00000516233 93 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RN7SKP238-201ENST00000516483 249 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RNA5SP271-201ENST00000516700 88 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC022616.3-201ENST00000523940 148 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 MIR4443-201ENST00000585052 53 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC018462.2-201ENST00000605375 395 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AL512624.1-201ENST00000613638 469 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC120057.5-201ENST00000623840 154 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 MAPK10-383ENST00000642032 3390 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC097504.1-201ENST00000515103 2415 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AL034417.4-202ENST00000642135 2236 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.84□□□□□ -1
PHF8Q9UPP1 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
PHF8Q9UPP1 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.83□□□□□ -1
PHF8Q9UPP1 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.83□□□□□ -1
PHF8Q9UPP1 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 RNA5SP477-201ENST00000362639 119 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 Y_RNA.307-201ENST00000365022 117 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC8.83□□□□□ -1
PHF8Q9UPP1 RNA5SP284-201ENST00000384547 118 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 Y_RNA.527-201ENST00000384573 102 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 Y_RNA.530-201ENST00000384587 101 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 RN7SKP144-201ENST00000411108 279 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 SDAD1P3-201ENST00000427380 333 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 RPL34P6-201ENST00000432390 345 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 RPL23AP30-201ENST00000432419 501 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AC119618.1-201ENST00000434191 222 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 AL353662.1-201ENST00000439099 327 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 DEFA11P-201ENST00000446470 261 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 MRPS31P2-201ENST00000451581 518 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 GMFBP1-201ENST00000467831 427 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 RPS4XP18-201ENST00000495480 763 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.83□□□□□ -1
PHF8Q9UPP1 RNU6-635P-201ENST00000516651 102 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.83□□□□□ -1
PHF8Q9UPP1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 OR4T1P-201ENST00000554933 911 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 TVP23CP2-201ENST00000571473 623 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 AC062037.2-201ENST00000610137 73 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AC127024.6-201ENST00000621598 424 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
PHF8Q9UPP1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.83□□□□□ -1
PHF8Q9UPP1 EFTUD1P2-201ENST00000514817 1603 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 SAGE3P-201ENST00000619800 1635 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 AL136984.1-201ENST00000607611 1893 ntBASIC8.83□□□□□ -1
PHF8Q9UPP1 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.83□□□□□ -1
PHF8Q9UPP1 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PHF8Q9UPP1 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.82□□□□□ -1
PHF8Q9UPP1 AC130360.2-201ENST00000533477 1556 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.82□□□□□ -1
PHF8Q9UPP1 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
PHF8Q9UPP1 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.82□□□□□ -1
PHF8Q9UPP1 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.82□□□□□ -1
PHF8Q9UPP1 RNU6-1188P-201ENST00000363795 107 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 RNU4-1-201ENST00000363925 141 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PHF8Q9UPP1 MIR1-2-201ENST00000384961 85 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 HMGB1P17-201ENST00000403495 628 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 RPS6P23-201ENST00000413224 722 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8.82□□□□□ -1
PHF8Q9UPP1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.82□□□□□ -1
PHF8Q9UPP1 PRPF38AP2-201ENST00000438179 851 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 RNU7-136P-201ENST00000458819 69 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.82□□□□□ -1
PHF8Q9UPP1 RN7SL273P-201ENST00000481561 299 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms