Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 MIR4277-201ENST00000578298 84 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 RPL7P50-201ENST00000600588 727 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 SNX6P1-201ENST00000601728 1224 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC084373.1-201ENST00000603311 235 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AP002802.2-201ENST00000605877 235 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC009974.1-201ENST00000608881 455 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AL157392.4-201ENST00000609756 345 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 AC010435.1-201ENST00000623353 1177 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.78□□□□□ -1.64
SIX4Q9UIU6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SIX4Q9UIU6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 CASC19-204ENST00000641001 2055 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 MFSD8-213ENST00000641134 1327 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 OR5P1P-201ENST00000299512 925 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 FAM3C2-201ENST00000312214 681 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 RNU6-1263P-201ENST00000384601 106 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 VDAC2P1-201ENST00000399358 958 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL034403.1-201ENST00000399414 885 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 UBE2V1P9-201ENST00000414760 368 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC008173.1-201ENST00000418901 264 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC115285.1-201ENST00000424879 736 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 DEFB130D-201ENST00000426866 237 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC016712.1-201ENST00000431088 378 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 FHP1-201ENST00000442741 703 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 ELOCP13-201ENST00000443934 329 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC069540.1-201ENST00000446320 988 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL591363.1-201ENST00000450091 483 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 Z95152.1-201ENST00000453556 656 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 RPL23AP24-201ENST00000458203 385 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC107398.1-201ENST00000486904 505 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 TPT1P3-201ENST00000492841 512 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 OR51K1P-201ENST00000510214 950 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 RFPL4AP5-201ENST00000514977 504 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 RN7SKP46-201ENST00000515942 234 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC091163.3-201ENST00000518269 1144 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 EEF1A1P37-201ENST00000522748 715 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL390726.5-202ENST00000564800 256 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC010735.1-201ENST00000567305 1026 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC068020.1-201ENST00000594215 661 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL160237.3-201ENST00000604114 1013 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 SUMO2P14-201ENST00000604488 293 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC004908.3-201ENST00000610248 625 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL035461.2-201ENST00000619201 524 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AL669942.2-201ENST00000620352 697 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 AC006963.1-201ENST00000624003 1052 ntBASIC4.77□□□□□ -1.65
SIX4Q9UIU6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SIX4Q9UIU6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms