Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AL049745.1-201ENST00000433953 286 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AP000936.3-201ENST00000438127 255 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 EXTL2P1-201ENST00000446218 416 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AL354714.3-201ENST00000447284 493 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 ART2BP-201ENST00000453501 499 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC010468.1-201ENST00000461022 817 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC069528.1-202ENST00000482888 637 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC108043.1-201ENST00000512696 574 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 SNORA3.4-201ENST00000515969 96 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 RNU5A-4P-201ENST00000516588 111 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 snoZ278.1-201ENST00000517059 112 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 HMGB1P1-201ENST00000522557 636 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC018442.3-201ENST00000523025 183 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 HIGD1AP5-201ENST00000529959 259 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC125494.3-201ENST00000602759 455 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AL360219.1-201ENST00000610230 366 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AP000255.1-201ENST00000610276 676 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 MIR1322-201ENST00000638013 71 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 RN7SKP104-201ENST00000362605 328 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 RNU6-249P-201ENST00000363016 102 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 SNORA51.8-201ENST00000384234 132 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 SNORA70.10-201ENST00000384515 134 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 MIR320B1-201ENST00000390209 79 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 SFR1P1-201ENST00000403720 688 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 RPS4XP9-201ENST00000405151 780 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 OR4K6P-201ENST00000416478 897 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC104454.1-201ENST00000421341 1401 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 USP9YP9-201ENST00000429406 715 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 FTH1P16-201ENST00000435241 552 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 RN7SL517P-201ENST00000462240 305 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 HMGN2P25-201ENST00000486956 268 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 HMGB3P16-201ENST00000508037 287 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC110775.1-201ENST00000513721 462 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC109446.2-201ENST00000567872 497 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL583856.2-201ENST00000606298 543 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL450489.1-201ENST00000612071 468 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL627230.1-201ENST00000613077 211 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AL591926.8-201ENST00000616876 211 ntBASIC5.1□□□□□ -1.59
USP29Q9HBJ7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms