Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 AL121657.1-201ENST00000327215 531 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 SNRPEP3-201ENST00000338402 276 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 RNU6-192P-201ENST00000391253 100 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 MYL6P5-201ENST00000412707 459 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 OR2AT2P-201ENST00000413438 905 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 TMBIM7P-201ENST00000418074 855 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 CENPIP1-201ENST00000425713 902 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 VDAC1P6-201ENST00000430062 855 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 TRIM60P18-201ENST00000441518 828 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 MTCO1P19-201ENST00000443487 500 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC023271.1-201ENST00000445936 1090 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 ELOCP30-201ENST00000447108 299 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AP000936.2-201ENST00000447151 681 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC079841.1-201ENST00000481228 950 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC090502.2-201ENST00000549267 280 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC091078.2-201ENST00000557145 559 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC006362.1-201ENST00000567392 174 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC068790.6-201ENST00000602558 258 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 U73023.1-201ENST00000603134 700 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC080078.2-201ENST00000603766 501 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC128687.1-201ENST00000605304 619 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 AL031775.1-201ENST00000607014 887 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC012360.2-201ENST00000609349 391 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 RN7SL787P-201ENST00000613000 284 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.05□□□□□ -1.6
VRK1Q99986 AP005431.1-201ENST00000618479 319 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC079228.1-201ENST00000624774 1049 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 AC092184.1-201ENST00000625042 715 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC092192.1-201ENST00000633154 1018 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 AC084035.1-201ENST00000634543 607 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 AC107081.3-201ENST00000612715 2034 ntBASIC5.05□□□□□ -1.6
VRK1Q99986 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK1Q99986 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VRK1Q99986 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK1Q99986 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK1Q99986 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
VRK1Q99986 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VRK1Q99986 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK1Q99986 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VRK1Q99986 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK1Q99986 MIR375-201ENST00000362103 64 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 RNU4-91P-201ENST00000364778 135 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 AC087752.1-201ENST00000391360 558 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 AL512422.1-201ENST00000407033 553 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VRK1Q99986 RNU2-50P-201ENST00000410494 143 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 RN7SKP286-201ENST00000410894 299 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK1Q99986 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK1Q99986 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK1Q99986 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK1Q99986 AL953862.1-201ENST00000423016 168 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.04□□□□□ -1.6
VRK1Q99986 SDCBPP2-201ENST00000424643 885 ntBASIC5.04□□□□□ -1.6
VRK1Q99986 IPMKP1-201ENST00000425988 855 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms