Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXR1Q6PIV2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC232271.1-201ENST00000602455 2715 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP44-201ENST00000363602 316 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP250-201ENST00000363924 321 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RNU6-702P-201ENST00000364982 107 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 Y_RNA.307-201ENST00000365022 117 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RNU6-619P-201ENST00000365146 108 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RNU6-1158P-201ENST00000391167 107 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RPLP1P10-201ENST00000413972 339 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 SNRPFP1-201ENST00000414761 252 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC083875.1-201ENST00000419509 405 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 PPIAP17-201ENST00000438507 471 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 LSM1P1-201ENST00000438629 273 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AL445991.1-201ENST00000450381 475 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 YWHAEP1-201ENST00000453697 763 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC138409.2-202ENST00000507274 458 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 KLHL2P1-201ENST00000508691 521 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC108120.2-201ENST00000512973 294 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RNU6-1314P-201ENST00000517139 104 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 IGLV3-6-201ENST00000523937 250 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 NMNAT1P1-201ENST00000554095 876 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC004232.1-201ENST00000571388 208 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC115621.1-201ENST00000604653 858 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AP000654.2-201ENST00000605633 586 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 MIR7109-201ENST00000613748 65 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC022106.2-201ENST00000620114 757 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 uc_338.22-201ENST00000622722 187 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC005618.4-201ENST00000625053 554 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AL355480.1-201ENST00000629041 99 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC006378.2-201ENST00000623178 2476 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 AC109446.4-201ENST00000623235 2755 ntBASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXR1Q6PIV2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RACGAP1P-201ENST00000550663 1879 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 Y_RNA.28-201ENST00000362554 111 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RNA5SP65-201ENST00000363166 119 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RNU6-1066P-201ENST00000363573 105 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 SNORA64.3-201ENST00000365647 134 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RN7SKP91-201ENST00000410852 288 ntBASIC6.73□□□□□ -1.33
FOXR1Q6PIV2 RNU4-14P-201ENST00000410858 122 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms