Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNA5SP123-201ENST00000363244 119 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RNU6-560P-201ENST00000364007 108 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RNU6-619P-201ENST00000365146 108 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RNA5SP455-201ENST00000365190 119 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 OR1L6-202ENST00000373684 1044 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 SNORA66-201ENST00000384792 133 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
EFNB3Q15768 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.36□□□□□ -1.71
EFNB3Q15768 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 RPL21P43-201ENST00000425440 472 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 DPRXP1-201ENST00000426312 460 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 MTCO1P54-201ENST00000430139 712 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 TMX2P1-201ENST00000436507 708 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 USP9YP22-201ENST00000438971 294 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 TXNP5-201ENST00000441043 315 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 FGF7P5-201ENST00000441829 291 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 TCEA1P3-201ENST00000443005 880 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 MTND2P22-201ENST00000444325 1033 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 NECAP1P2-201ENST00000455668 727 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RNU6-1218P-201ENST00000458990 108 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AP000942.1-201ENST00000463969 747 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RN7SL443P-201ENST00000464331 290 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 NDUFA5P9-201ENST00000472609 340 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 VPS26AP1-201ENST00000483197 979 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 COX6B1P2-201ENST00000489624 230 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC104971.1-201ENST00000495117 578 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AP000926.4-201ENST00000527351 454 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC010198.2-201ENST00000550612 259 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC008088.1-201ENST00000580993 280 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AC013444.2-201ENST00000603317 787 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.36□□□□□ -1.71
EFNB3Q15768 AP005432.2-201ENST00000608162 586 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AP004247.3-201ENST00000608682 624 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC116651.1-201ENST00000609724 556 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC091932.2-201ENST00000623014 291 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB3Q15768 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 ADAM5-202ENST00000399789 1942 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB3Q15768 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB3Q15768 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
EFNB3Q15768 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.36□□□□□ -1.71
EFNB3Q15768 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.35□□□□□ -1.71
EFNB3Q15768 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.35□□□□□ -1.71
EFNB3Q15768 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.35□□□□□ -1.71
EFNB3Q15768 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EFNB3Q15768 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EFNB3Q15768 AC009313.2-201ENST00000417893 1941 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EFNB3Q15768 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
EFNB3Q15768 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EFNB3Q15768 RNA5SP428-201ENST00000365129 132 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
EFNB3Q15768 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EFNB3Q15768 SNORD116-8-201ENST00000384365 95 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
EFNB3Q15768 SFR1P1-201ENST00000403720 688 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 GSTM3P2-201ENST00000412746 530 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 MFSD13B-201ENST00000420133 1290 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.35□□□□□ -1.71
EFNB3Q15768 USP9YP31-201ENST00000431405 881 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.35□□□□□ -1.71
EFNB3Q15768 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.35□□□□□ -1.71
EFNB3Q15768 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.35□□□□□ -1.71
EFNB3Q15768 OR7E125P-201ENST00000443450 846 ntBASIC4.35□□□□□ -1.71
EFNB3Q15768 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EFNB3Q15768 ATG12P2-201ENST00000456830 416 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms