Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 VN1R92P-201ENST00000598511 928 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 AL442067.2-201ENST00000614033 363 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 DDX18P4-201ENST00000511690 1966 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SCN7AQ01118 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN7AQ01118 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN7AQ01118 MIR1251-201ENST00000408552 70 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 RPS29P4-201ENST00000414733 161 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 HMGB1P37-201ENST00000439613 609 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN7AQ01118 AL358832.1-201ENST00000497800 389 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN7AQ01118 RN7SKP13-201ENST00000515933 244 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 RNA5SP208-201ENST00000516156 78 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 AC022695.1-201ENST00000522089 237 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN7AQ01118 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN7AQ01118 AC006363.1-201ENST00000603806 463 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 AC095038.2-201ENST00000621464 1070 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN7AQ01118 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN7AQ01118 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SCN7AQ01118 AC073346.2-201ENST00000624724 2058 ntBASIC4.82□□□□□ -1.64
SCN7AQ01118 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN7AQ01118 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN7AQ01118 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SCN7AQ01118 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN7AQ01118 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SCN7AQ01118 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 NDUFB4P4-201ENST00000404822 243 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 RPS7P15-201ENST00000415804 584 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN7AQ01118 HSPD1P15-201ENST00000505573 1122 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN7AQ01118 AC093014.1-201ENST00000548926 724 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 DUX4L52-201ENST00000549363 777 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN7AQ01118 AC068020.1-201ENST00000594215 661 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 AL354760.1-201ENST00000608357 643 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN7AQ01118 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN7AQ01118 AC119674.1-207ENST00000641355 633 ntBASIC4.81□□□□□ -1.64
SCN7AQ01118 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SCN7AQ01118 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SCN7AQ01118 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN7AQ01118 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN7AQ01118 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 PRO1804-201ENST00000623780 2050 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN7AQ01118 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 RPL31P61-201ENST00000496160 376 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 RAC1P2-201ENST00000511164 579 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 RNA5SP164-201ENST00000516533 110 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN7AQ01118 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 AC007458.1-201ENST00000542812 373 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AC037471.2-201ENST00000564941 598 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN7AQ01118 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SCN7AQ01118 AC243312.2-201ENST00000623340 601 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AL773545.4-201ENST00000637262 310 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AL513478.4-201ENST00000641636 310 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN7AQ01118 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SCN7AQ01118 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 ZNF602P-201ENST00000405929 924 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 SNORA3C-201ENST00000408792 125 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN7AQ01118 RPL21P23-201ENST00000446654 460 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 AC073387.1-201ENST00000453261 709 ntBASIC4.8□□□□□ -1.64
SCN7AQ01118 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN7AQ01118 UBDP1-202ENST00000457888 382 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms