Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC068790.5-201ENST00000602741 355 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 ELOCP34-201ENST00000604436 327 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 AL158211.2-201ENST00000607282 395 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 AC100827.5-201ENST00000615883 426 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.27□□□□□ -1.73
CDKL1Q00532 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL1Q00532 AP002967.1-201ENST00000624203 539 ntBASIC4.27□□□□□ -1.73
CDKL1Q00532 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CDKL1Q00532 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL1Q00532 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 OR5P1P-201ENST00000299512 925 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDKL1Q00532 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDKL1Q00532 RNU6-796P-201ENST00000391086 107 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC093719.1-202ENST00000392735 373 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 ATF1P1-201ENST00000406040 927 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 NCSTNP1-201ENST00000406229 144 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC119751.6-201ENST00000416712 186 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AL139095.3-201ENST00000419672 1203 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AL356387.2-201ENST00000422272 243 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 RPS12P5-201ENST00000423449 371 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 MTND2P11-201ENST00000423638 648 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 RPL23AP1-201ENST00000428990 471 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 LYPLA1P1-201ENST00000434514 622 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC074367.1-201ENST00000438685 1125 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AL138878.2-201ENST00000440581 1241 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC069540.1-201ENST00000446320 988 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 ARL2BPP10-201ENST00000446487 531 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 ATP1B1P1-201ENST00000509767 915 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 SNORA76.2-201ENST00000517095 137 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 IGKV2D-10-201ENST00000520194 281 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 VTA1P2-201ENST00000520205 911 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.26□□□□□ -1.73
CDKL1Q00532 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL1Q00532 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL1Q00532 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL1Q00532 RMST_9.1-201ENST00000619945 193 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AP001005.3-201ENST00000622049 129 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 MIR6730-201ENST00000622213 67 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC010435.1-201ENST00000623353 1177 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL1Q00532 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL1Q00532 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL1Q00532 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL1Q00532 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
CDKL1Q00532 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 AC093311.1-201ENST00000506586 2021 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 AL512283.1-201ENST00000606756 1384 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 AC027228.2-201ENST00000567141 2154 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL1Q00532 AL132640.2-201ENST00000559968 1698 ntBASIC4.26□□□□□ -1.73
CDKL1Q00532 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDKL1Q00532 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDKL1Q00532 ZNF90P1-201ENST00000480493 1951 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL1Q00532 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL1Q00532 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL1Q00532 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDKL1Q00532 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL1Q00532 AC008033.1-201ENST00000216407 1162 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 OR10J6P-201ENST00000289731 930 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 OR52B1P-201ENST00000316506 909 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
CDKL1Q00532 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL1Q00532 SNORA62.2-201ENST00000364672 152 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 RNU6-304P-201ENST00000364855 107 ntBASIC4.25□□□□□ -1.73
CDKL1Q00532 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL1Q00532 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL1Q00532 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms