Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RN7SKP222-201ENST00000410651 315 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AL592310.1-201ENST00000414330 671 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 USP9YP21-201ENST00000420603 432 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 RGS17P1-201ENST00000423358 553 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 RPL12P34-201ENST00000424532 479 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 MTND2P5-201ENST00000432656 1006 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 RPL34P26-201ENST00000445636 354 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC073264.2-201ENST00000448886 166 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 MTND2P8-201ENST00000450555 1025 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC022795.1-201ENST00000473808 480 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC098862.1-201ENST00000504991 413 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC073358.1-201ENST00000505671 684 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC113420.1-201ENST00000507903 571 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.67□□□□□ -1.66
CLCNKAP51800 OR10V3P-201ENST00000525712 725 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AP006289.1-201ENST00000538089 277 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCNKAP51800 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCNKAP51800 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC133552.5-201ENST00000604266 540 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC097655.1-201ENST00000635075 318 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 OR6C71P-202ENST00000641886 1107 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLCNKAP51800 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCNKAP51800 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CLCNKAP51800 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLCNKAP51800 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCNKAP51800 AC107068.1-201ENST00000563286 4218 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCNKAP51800 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCNKAP51800 DDX18P5-201ENST00000534547 1306 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 CCT8P1-201ENST00000413611 1657 ntBASIC4.67□□□□□ -1.66
CLCNKAP51800 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 Z95327.2-201ENST00000414579 1873 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 CASC19-204ENST00000641001 2055 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 AP001273.1-201ENST00000624493 3152 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 RNA5SP27-201ENST00000363839 119 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 RNU4-31P-201ENST00000384211 141 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 RNU6-185P-201ENST00000384421 107 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCNKAP51800 RNU6-932P-201ENST00000391108 106 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCNKAP51800 TMBIM7P-201ENST00000418074 855 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCNKAP51800 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 ELOCP11-201ENST00000436690 332 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCNKAP51800 OR10R1P-201ENST00000441524 1141 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCNKAP51800 AC011753.3-201ENST00000443436 406 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 ELOCP13-201ENST00000443934 329 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 ELOCP16-201ENST00000444494 332 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AL358794.1-201ENST00000445689 381 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 MTND1P33-201ENST00000446251 917 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 AC098826.2-201ENST00000452011 651 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCNKAP51800 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCNKAP51800 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCNKAP51800 RNA5SP249-201ENST00000516127 99 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCNKAP51800 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCNKAP51800 EEF1A1P37-201ENST00000522748 715 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 SMARCE1P4-201ENST00000523647 241 ntBASIC4.66□□□□□ -1.66
CLCNKAP51800 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCNKAP51800 OR8K4P-201ENST00000534608 872 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms