Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 GAPDHP58-201ENST00000438477 1006 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RPS29P10-201ENST00000439197 166 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 RHEBP2-201ENST00000450289 600 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 GYG1P1-201ENST00000460864 698 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RN7SL610P-201ENST00000463845 291 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RPL5P30-201ENST00000465511 891 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC009127.1-201ENST00000467090 155 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC004453.1-201ENST00000487895 408 ntBASIC4.07□□□□□ -1.76
CDX1P47902 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AC008953.1-201ENST00000497334 318 ntBASIC4.07□□□□□ -1.76
CDX1P47902 HMGB1P21-201ENST00000502313 581 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AC006427.1-201ENST00000514359 712 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RNU6-488P-201ENST00000515918 99 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RNU6-202P-201ENST00000515998 96 ntBASIC4.07□□□□□ -1.76
CDX1P47902 SNORA19.3-201ENST00000516165 130 ntBASIC4.07□□□□□ -1.76
CDX1P47902 RN7SKP66-201ENST00000516681 231 ntBASIC4.07□□□□□ -1.76
CDX1P47902 snoZ278.1-201ENST00000517059 112 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 NDUFS5P6-201ENST00000529136 295 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC006518.1-201ENST00000541449 943 ntBASIC4.07□□□□□ -1.76
CDX1P47902 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 AC087897.1-201ENST00000550134 156 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 AL161713.1-201ENST00000555538 145 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.07□□□□□ -1.76
CDX1P47902 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AL022067.1-201ENST00000602426 454 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC005191.1-201ENST00000603950 358 ntBASIC4.07□□□□□ -1.76
CDX1P47902 IMMP1LP1-201ENST00000605170 488 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL021707.7-201ENST00000607991 416 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AP004247.3-201ENST00000608682 624 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL121652.1-201ENST00000608851 448 ntBASIC4.07□□□□□ -1.76
CDX1P47902 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 AL359535.1-201ENST00000612100 1087 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AP002799.1-201ENST00000623552 423 ntBASIC4.07□□□□□ -1.76
CDX1P47902 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 AC099654.9-201ENST00000637055 678 ntBASIC4.07□□□□□ -1.76
CDX1P47902 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDX1P47902 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.06□□□□□ -1.76
CDX1P47902 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDX1P47902 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 AL645568.2-201ENST00000432815 1337 ntBASIC4.06□□□□□ -1.76
CDX1P47902 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDX1P47902 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDX1P47902 RNU1-108P-201ENST00000362556 161 ntBASIC4.06□□□□□ -1.76
CDX1P47902 U3.3-201ENST00000362986 216 ntBASIC4.06□□□□□ -1.76
CDX1P47902 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDX1P47902 MIR122-201ENST00000385044 85 ntBASIC4.06□□□□□ -1.76
CDX1P47902 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDX1P47902 SFR1P1-201ENST00000403720 688 ntBASIC4.06□□□□□ -1.76
CDX1P47902 MIR1182-201ENST00000408363 97 ntBASIC4.06□□□□□ -1.76
CDX1P47902 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 AC004987.3-201ENST00000413879 771 ntBASIC4.06□□□□□ -1.76
CDX1P47902 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.06□□□□□ -1.76
CDX1P47902 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.06□□□□□ -1.76
CDX1P47902 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.06□□□□□ -1.76
CDX1P47902 RPS27P18-201ENST00000431701 247 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 PTMAP6-201ENST00000439110 327 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.06□□□□□ -1.76
CDX1P47902 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.06□□□□□ -1.76
CDX1P47902 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.06□□□□□ -1.76
CDX1P47902 AC073850.1-201ENST00000449243 255 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AL121877.1-201ENST00000453704 622 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC133473.1-201ENST00000455173 299 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.06□□□□□ -1.76
CDX1P47902 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 RPL7AP6-201ENST00000477943 801 ntBASIC4.06□□□□□ -1.76
CDX1P47902 RN7SL97P-201ENST00000486780 299 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC073073.1-201ENST00000493920 463 ntBASIC4.06□□□□□ -1.76
CDX1P47902 PRELID3BP6-201ENST00000503839 571 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC090071.1-201ENST00000507713 644 ntBASIC4.06□□□□□ -1.76
CDX1P47902 OR51K1P-201ENST00000510214 950 ntBASIC4.06□□□□□ -1.76
CDX1P47902 RNU6-1028P-201ENST00000517164 93 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.06□□□□□ -1.76
CDX1P47902 OR5M2P-201ENST00000529003 936 ntBASIC4.06□□□□□ -1.76
CDX1P47902 LRRC6P1-201ENST00000532188 885 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.06□□□□□ -1.76
CDX1P47902 AC092490.3-201ENST00000545370 572 ntBASIC4.06□□□□□ -1.76
CDX1P47902 AC074029.1-201ENST00000552531 1044 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms