Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 UBE2V1P11-201ENST00000411559 285 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AC016397.1-201ENST00000412463 242 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 RPL23AP1-201ENST00000428990 471 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 CNOT7P1-201ENST00000429006 852 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AC005189.1-201ENST00000431286 310 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC009220.1-201ENST00000451614 275 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFRAP16234 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFRAP16234 MTND2P28-201ENST00000457540 1044 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 RPL23AP65-201ENST00000475608 468 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AC104687.1-201ENST00000485829 412 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC010285.3-201ENST00000511668 676 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFRAP16234 OR5AK3P-201ENST00000527486 1297 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC025260.1-201ENST00000548858 430 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AL121594.4-201ENST00000556211 1196 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 VN1R84P-201ENST00000593697 235 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 RPL12P25-202ENST00000598100 674 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFRAP16234 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AC019193.2-201ENST00000610012 634 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 AL163051.2-201ENST00000618976 735 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.72□□□□□ -1.65
PDGFRAP16234 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.72□□□□□ -1.65
PDGFRAP16234 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDGFRAP16234 AL592148.3-201ENST00000608771 2646 ntBASIC4.72□□□□□ -1.65
PDGFRAP16234 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFRAP16234 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDGFRAP16234 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDGFRAP16234 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.71□□□□□ -1.65
PDGFRAP16234 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFRAP16234 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 RNU4-27P-201ENST00000410889 139 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 CEACAMP8-201ENST00000413902 580 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC009480.2-201ENST00000422916 432 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC009965.2-201ENST00000425328 970 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AP001324.1-201ENST00000428553 399 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 RPL23AP43-201ENST00000446445 471 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 MTND2P8-201ENST00000450555 1025 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 TPMTP4-201ENST00000450749 678 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFRAP16234 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.71□□□□□ -1.66
PDGFRAP16234 UBTFL9-201ENST00000534504 1148 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 GSTP1P1-201ENST00000548078 319 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 RPL21P7-201ENST00000557463 483 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC084757.1-201ENST00000559987 490 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC104229.1-201ENST00000561364 255 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.71□□□□□ -1.66
PDGFRAP16234 MIR4715-201ENST00000584117 79 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC090181.2-201ENST00000602975 672 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC007423.1-201ENST00000605009 627 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC123768.4-201ENST00000616244 701 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC106730.3-201ENST00000624568 641 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AC116563.2-201ENST00000624751 535 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 MIR7641-1-201ENST00000627518 61 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 OR2L1P-202ENST00000641567 1023 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.71□□□□□ -1.66
PDGFRAP16234 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDGFRAP16234 MTND4P31-201ENST00000425607 1343 ntBASIC4.71□□□□□ -1.66
PDGFRAP16234 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms