Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A1P12107 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A1P12107 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A1P12107 ZNF962P-201ENST00000443465 3140 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AC005261.6-201ENST00000623072 1387 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL11A1P12107 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL11A1P12107 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL11A1P12107 RNA5SP146-201ENST00000410743 123 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.42□□□□□ -1.7
COL11A1P12107 NPM1P25-201ENST00000429734 854 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AL159987.2-201ENST00000432754 307 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 ARL4AP3-201ENST00000441452 574 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 RPL7P49-201ENST00000471402 708 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 HMGN1P15-201ENST00000513870 295 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC084759.1-201ENST00000561168 290 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.42□□□□□ -1.7
COL11A1P12107 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.42□□□□□ -1.7
COL11A1P12107 U3.45-201ENST00000607547 219 ntBASIC4.42□□□□□ -1.7
COL11A1P12107 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.41□□□□□ -1.7
COL11A1P12107 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 AP004289.2-201ENST00000444413 1457 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 DDX18P4-201ENST00000511690 1966 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 AL356274.2-201ENST00000624379 3752 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL11A1P12107 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 SNORD3H-201ENST00000384486 214 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 AC096664.2-201ENST00000411843 406 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.41□□□□□ -1.7
COL11A1P12107 snoU13.24-201ENST00000458998 104 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.41□□□□□ -1.7
COL11A1P12107 SCARNA13-201ENST00000516672 275 ntBASIC4.41□□□□□ -1.7
COL11A1P12107 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.41□□□□□ -1.7
COL11A1P12107 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
COL11A1P12107 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL11A1P12107 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.41□□□□□ -1.7
COL11A1P12107 NDUFB4P4-201ENST00000404822 243 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 PDSS1P1-201ENST00000422953 1114 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 MTCO1P54-201ENST00000430139 712 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL11A1P12107 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.4□□□□□ -1.7
COL11A1P12107 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
COL11A1P12107 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL11A1P12107 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.4□□□□□ -1.7
COL11A1P12107 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.4□□□□□ -1.7
COL11A1P12107 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL11A1P12107 CYCSP30-201ENST00000546447 172 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.4□□□□□ -1.7
COL11A1P12107 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL11A1P12107 MIR4298-201ENST00000584380 73 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 MIR3651-201ENST00000630427 90 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 AL773545.4-201ENST00000637262 310 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.7
COL11A1P12107 AL513478.4-201ENST00000641636 310 ntBASIC4.4□□□□□ -1.7
COL11A1P12107 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.4□□□□□ -1.7
COL11A1P12107 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL11A1P12107 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
COL11A1P12107 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.4□□□□□ -1.71
COL11A1P12107 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.4□□□□□ -1.71
COL11A1P12107 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL11A1P12107 MIR490-201ENST00000384865 128 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
COL11A1P12107 MIR1251-201ENST00000408552 70 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AL390879.2-203ENST00000426943 1121 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AP000907.1-201ENST00000428428 510 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC011742.1-201ENST00000431448 434 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 AC006511.1-201ENST00000470614 315 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.39□□□□□ -1.71
COL11A1P12107 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.39□□□□□ -1.71
COL11A1P12107 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.39□□□□□ -1.71
COL11A1P12107 MAPK10-303ENST00000641324 3959 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
COL11A1P12107 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL11A1P12107 MIR183-201ENST00000384958 110 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 MIR199A2-201ENST00000385289 110 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 ATP5F1P4-201ENST00000397288 746 ntBASIC4.39□□□□□ -1.71
COL11A1P12107 SYF2P2-201ENST00000417620 583 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms