Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 PIGFP2-201ENST00000421400 651 ntBASIC6.39□□□□□ -1.39
SOX1O00570 CYCSP52-201ENST00000422857 310 ntBASIC6.39□□□□□ -1.39
SOX1O00570 RPS27AP6-201ENST00000427962 448 ntBASIC6.39□□□□□ -1.39
SOX1O00570 SKP1P1-201ENST00000438081 489 ntBASIC6.39□□□□□ -1.39
SOX1O00570 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 RPL7P59-201ENST00000447700 943 ntBASIC6.39□□□□□ -1.39
SOX1O00570 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 RNU6-583P-201ENST00000516012 92 ntBASIC6.39□□□□□ -1.39
SOX1O00570 CYCSP2-201ENST00000558168 301 ntBASIC6.39□□□□□ -1.39
SOX1O00570 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 AC126915.2-201ENST00000610957 190 ntBASIC6.39□□□□□ -1.39
SOX1O00570 AC083809.1-201ENST00000615051 472 ntBASIC6.39□□□□□ -1.39
SOX1O00570 AC231657.1-201ENST00000624313 397 ntBASIC6.39□□□□□ -1.39
SOX1O00570 AC110994.2-201ENST00000635481 492 ntBASIC6.39□□□□□ -1.39
SOX1O00570 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.39□□□□□ -1.39
SOX1O00570 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.39□□□□□ -1.39
SOX1O00570 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SOX1O00570 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SOX1O00570 ICE2P1-201ENST00000512800 1849 ntBASIC6.39□□□□□ -1.39
SOX1O00570 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 AL034417.4-202ENST00000642135 2236 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 CTAGE11P-201ENST00000451540 2353 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC007938.2-201ENST00000604666 2634 ntBASIC6.38□□□□□ -1.39
SOX1O00570 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 OR4A15-201ENST00000314706 1035 ntBASIC6.38□□□□□ -1.39
SOX1O00570 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 RNA5SP319-201ENST00000362768 119 ntBASIC6.38□□□□□ -1.39
SOX1O00570 Y_RNA.326-201ENST00000365176 113 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 OR52E6-202ENST00000379946 954 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RNU6-533P-201ENST00000384144 107 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RNU1-77P-201ENST00000390868 162 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AL360271.1-201ENST00000395679 510 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RPS16P5-201ENST00000406501 404 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 RPL23AP4-201ENST00000427757 463 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC016712.1-201ENST00000431088 378 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC002486.1-201ENST00000435098 391 ntBASIC6.38□□□□□ -1.39
SOX1O00570 TPT1P12-201ENST00000448968 492 ntBASIC6.38□□□□□ -1.39
SOX1O00570 SLC31A1P1-201ENST00000451221 567 ntBASIC6.38□□□□□ -1.39
SOX1O00570 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.38□□□□□ -1.39
SOX1O00570 AC114728.1-201ENST00000488289 483 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AL035404.1-201ENST00000497982 568 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.38□□□□□ -1.39
SOX1O00570 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.38□□□□□ -1.39
SOX1O00570 snoU109.5-201ENST00000516231 132 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AL110118.1-201ENST00000553543 400 ntBASIC6.38□□□□□ -1.39
SOX1O00570 RPL21P5-201ENST00000554662 472 ntBASIC6.38□□□□□ -1.39
SOX1O00570 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.38□□□□□ -1.39
SOX1O00570 SNORD39.2-201ENST00000579995 76 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC090312.2-201ENST00000582687 378 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC087783.2-201ENST00000605070 562 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 AC002550.2-201ENST00000621246 394 ntBASIC6.38□□□□□ -1.39
SOX1O00570 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.38□□□□□ -1.39
SOX1O00570 PISRT1-201ENST00000626175 531 ntBASIC6.38□□□□□ -1.39
SOX1O00570 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.38□□□□□ -1.39
SOX1O00570 ATE1-AS1-202ENST00000636460 506 ntBASIC6.38□□□□□ -1.39
SOX1O00570 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.38□□□□□ -1.39
SOX1O00570 PANDAR-201ENST00000629595 1506 ntBASIC6.38□□□□□ -1.39
SOX1O00570 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SOX1O00570 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX1O00570 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX1O00570 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms