Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PCDHB13Q9Y5F0 AC124045.1-201ENST00000606008 1953 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC011369.2-201ENST00000624423 1567 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC134882.1-201ENST00000603738 1676 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 MAPK10-377ENST00000642006 2752 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RNU6-97P-201ENST00000363387 104 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RNU6-1154P-201ENST00000391001 104 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RPL34P19-201ENST00000415903 342 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 HBBP1-201ENST00000433329 439 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC000362.1-201ENST00000433725 425 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RPS18P1-201ENST00000447840 458 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC022730.2-201ENST00000465359 452 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SL549P-201ENST00000478997 282 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SL338P-201ENST00000481467 293 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC006070.1-201ENST00000508151 193 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC233724.10-201ENST00000510454 409 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC024405.2-202ENST00000532731 184 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC007136.1-201ENST00000589141 199 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC004852.1-201ENST00000605206 154 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AL022238.3-201ENST00000609279 443 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AL034408.1-201ENST00000637712 664 ntBASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.31□□□□□ -1.08
PCDHB13Q9Y5F0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC131649.2-201ENST00000624925 4439 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC018992.1-201ENST00000523778 2149 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 LINC02035-201ENST00000610128 5476 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC103710.2-202ENST00000641454 2853 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 THAP12P4-201ENST00000528321 2266 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 SNORD46-201ENST00000364043 104 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RNU1-85P-201ENST00000364127 164 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 Y_RNA.304-201ENST00000365011 112 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 MIR19A-201ENST00000384878 82 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 MIR128-2-201ENST00000384893 84 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC004386.1-201ENST00000393214 761 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 SNORA2C-201ENST00000408564 137 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC017104.2-201ENST00000417000 321 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RHOT1P3-201ENST00000436571 331 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 snoU13.8-201ENST00000458890 104 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RPL7AP56-201ENST00000476420 791 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SL153P-201ENST00000486501 292 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 RN7SL101P-201ENST00000496350 279 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 STX3-204ENST00000530221 534 ntTSL 5 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 OR7E96P-201ENST00000530816 976 ntBASIC8.3□□□□□ -1.08
PCDHB13Q9Y5F0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms