Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC012414.7-202ENST00000622705 1090 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AP002967.1-201ENST00000624203 539 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC079416.3-201ENST00000624479 549 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 CU459211.1-201ENST00000635667 749 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 MTND4P31-201ENST00000425607 1343 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 AC008758.3-201ENST00000507003 1829 ntBASIC4.9□□□□□ -1.63
PKP3Q9Y446 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PKP3Q9Y446 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PKP3Q9Y446 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC009643.2-201ENST00000603543 1448 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 SNORA74A-201ENST00000364089 198 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC005522.1-201ENST00000395416 346 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL645733.1-201ENST00000402250 217 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL357515.1-201ENST00000402967 542 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL079342.2-201ENST00000403367 482 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 RNA5SP296-201ENST00000410523 111 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 OR5M12P-201ENST00000423388 929 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 OR5AW1P-201ENST00000426334 1006 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 NPM1P22-201ENST00000427761 952 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AP001324.1-201ENST00000428553 399 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 VN1R40P-201ENST00000455196 941 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 RN7SL515P-201ENST00000463999 297 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 RN7SL329P-201ENST00000467740 299 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC113347.3-201ENST00000509113 148 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 ENPP7P9-201ENST00000514456 627 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 RNA5SP249-201ENST00000516127 99 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC027308.1-201ENST00000517993 110 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC005868.1-201ENST00000536421 331 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC090695.1-201ENST00000561269 1222 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 MIR5708-201ENST00000579723 85 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 MIR4646-201ENST00000580775 63 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 VN1R88P-201ENST00000596787 292 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AL392112.1-201ENST00000605115 829 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC010424.2-201ENST00000607594 443 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AP000238.1-201ENST00000608759 426 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC091304.6-201ENST00000619761 202 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 MIR6719-201ENST00000622428 87 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC015726.3-201ENST00000624501 418 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 HSPA8P17-201ENST00000427029 1382 ntBASIC4.89□□□□□ -1.63
PKP3Q9Y446 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PKP3Q9Y446 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.89□□□□□ -1.63
PKP3Q9Y446 AC000367.1-201ENST00000452711 1766 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AL731566.1-201ENST00000620490 1937 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms