Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BX005019.1-201ENST00000561881 1810 ntBASIC5.59□□□□□ -1.51
HPS3Q969F9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HPS3Q969F9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
HPS3Q969F9 ECM1P2-201ENST00000503354 1577 ntBASIC5.59□□□□□ -1.52
HPS3Q969F9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HPS3Q969F9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HPS3Q969F9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
HPS3Q969F9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 RNU4-44P-201ENST00000363050 141 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 RNU6-560P-201ENST00000364007 108 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HPS3Q969F9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 RNU2-6P-201ENST00000411404 190 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 OR6C64P-201ENST00000419708 825 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 RPL21P43-201ENST00000425440 472 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 MTCO1P54-201ENST00000430139 712 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AL008629.1-201ENST00000438615 184 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 FGF7P5-201ENST00000441829 291 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 EEF1B2P5-201ENST00000444820 548 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 Z83846.1-201ENST00000446798 265 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AC015724.1-201ENST00000478577 156 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 RPL5P22-201ENST00000480199 884 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AC104971.1-201ENST00000495117 578 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 SNRPCP2-201ENST00000504370 475 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 NDUFB4P12-201ENST00000513465 390 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AP000926.4-201ENST00000527351 454 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 AC007834.2-201ENST00000536310 343 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 OSBPL9P5-201ENST00000542581 171 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AC010198.2-201ENST00000550612 259 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AL442163.2-201ENST00000553912 710 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AC115085.1-201ENST00000588924 229 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 PSMA6P4-201ENST00000603247 718 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AC018695.5-201ENST00000605872 315 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 AP003392.5-201ENST00000607857 415 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 AC004948.1-201ENST00000609858 672 ntBASIC5.58□□□□□ -1.52
HPS3Q969F9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.58□□□□□ -1.52
HPS3Q969F9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
HPS3Q969F9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HPS3Q969F9 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC092162.3-201ENST00000624511 1624 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 U8.4-201ENST00000363626 134 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 RNA5SP455-201ENST00000365190 119 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 NPM1P40-201ENST00000412758 733 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.57□□□□□ -1.52
HPS3Q969F9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.57□□□□□ -1.52
HPS3Q969F9 NPM1P39-201ENST00000449818 867 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AC234781.3-201ENST00000452540 973 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 RPS17P2-201ENST00000461663 408 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 HMGN2P25-201ENST00000486956 268 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms