Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GVINP1-202ENST00000531871 7271 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL049872.1-201ENST00000556323 322 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 MIR4505-201ENST00000582238 73 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 KPNA2P3-201ENST00000584190 848 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC005771.1-201ENST00000585581 349 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC018926.3-201ENST00000618841 406 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC241377.1-201ENST00000619797 406 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC092650.2-201ENST00000619984 902 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC018809.2-201ENST00000602436 3823 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 CDR1-202ENST00000625883 1485 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-694P-201ENST00000364071 147 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 Y_RNA.303-201ENST00000364998 94 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP293-201ENST00000411389 296 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL136133.1-201ENST00000413694 376 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 PRUNEP1-201ENST00000425846 705 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL662874.1-201ENST00000426065 230 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC239367.2-201ENST00000447309 705 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 FRG2FP-204ENST00000453982 852 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RPS23P2-201ENST00000463671 415 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC004924.1-201ENST00000480160 781 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RN7SL570P-201ENST00000484405 292 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC009120.1-201ENST00000493458 473 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL136038.1-201ENST00000497246 351 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 HMGB1P28-201ENST00000507778 552 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 HMGB1P44-201ENST00000508597 572 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-314P-201ENST00000516574 104 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC139365.2-201ENST00000517972 253 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC090751.1-201ENST00000566966 267 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL354760.1-201ENST00000608357 643 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL359314.1-201ENST00000616913 261 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL355974.3-201ENST00000617383 467 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC005899.7-201ENST00000618199 588 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC072046.2-201ENST00000618366 268 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC022140.2-201ENST00000623500 188 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AL157786.1-207ENST00000627771 695 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 OR5AK4P-201ENST00000635912 903 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC073869.7-201ENST00000640874 297 ntBASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM48Q8IWZ4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC093671.1-201ENST00000624981 2929 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AL161756.3-201ENST00000641216 2071 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 KYNUP3-201ENST00000574386 1341 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms