Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL773545.4-201ENST00000637262 310 ntBASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 AL513478.4-201ENST00000641636 310 ntBASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 SNORA3C-201ENST00000408792 125 ntBASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 AC005008.1-201ENST00000456151 612 ntBASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 snoU13.24-201ENST00000458998 104 ntBASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDC42BPAQ5VT25 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 AP001273.1-201ENST00000624493 3152 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 RN7SKP97-201ENST00000410966 333 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 RPS7P15-201ENST00000415804 584 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 CAB39P1-201ENST00000502277 460 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 RNA5SP164-201ENST00000516533 110 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 SNORA70.18-201ENST00000516696 98 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 AC037471.2-201ENST00000564941 598 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 AL138820.1-201ENST00000617901 5305 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 MAPK10-320ENST00000641462 6696 ntBASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDC42BPAQ5VT25 MIR1251-201ENST00000408552 70 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 DUX4L52-201ENST00000549363 777 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 AC011471.1-201ENST00000585766 187 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 AC026368.1-201ENST00000614934 690 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 A2MP1-204ENST00000566278 4130 ntBASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.8□□□□□ -1.48
CDC42BPAQ5VT25 NDUFB4P4-201ENST00000404822 243 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 MAPRE1P3-201ENST00000435438 796 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 BNIP3P41-202ENST00000616656 861 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 HSPE1P16-201ENST00000426640 348 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AC084198.1-201ENST00000477747 402 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AC008011.1-201ENST00000545989 227 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AL392088.2-201ENST00000637607 285 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AC007823.1-201ENST00000569932 1566 ntBASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDC42BPAQ5VT25 AC083899.2-201ENST00000423285 1376 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 AP001284.1-201ENST00000528393 2118 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 SNORD9-201ENST00000362566 104 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 ZNF602P-201ENST00000405929 924 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 RPS29P4-201ENST00000414733 161 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 OR5B10P-201ENST00000532869 642 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 AL031985.2-201ENST00000600955 480 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 AL355365.1-201ENST00000616480 294 ntBASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDC42BPAQ5VT25 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms