Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP41Q3LFD5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP41Q3LFD5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP41Q3LFD5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.96□□□□□ -1.62
USP41Q3LFD5 AC125257.1-201ENST00000560400 2930 ntBASIC4.96□□□□□ -1.62
USP41Q3LFD5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 BTBD10P1-201ENST00000549824 1352 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 RNU5B-4P-201ENST00000363508 111 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 PTP4A1P7-201ENST00000423476 514 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 RSL24D1P6-201ENST00000426934 401 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC092685.1-201ENST00000447960 1243 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 RNU7-27P-201ENST00000459281 62 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 RPL7P48-201ENST00000461513 746 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC011276.1-201ENST00000469688 323 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC103987.1-201ENST00000473394 348 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 HMGB1P38-201ENST00000490557 577 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC083829.1-201ENST00000503756 657 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 CYB5AP5-201ENST00000549779 389 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC068831.4-201ENST00000556118 109 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC084759.1-201ENST00000561168 290 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 RN7SL622P-201ENST00000585292 275 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC023762.1-201ENST00000603280 584 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC090525.3-201ENST00000605601 189 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC011374.2-201ENST00000607135 526 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC090912.3-201ENST00000609775 533 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC005962.2-201ENST00000611427 652 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC084824.4-201ENST00000620106 731 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AL669942.2-201ENST00000620352 697 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AP003497.2-201ENST00000624220 967 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 OR4G3P-201ENST00000633500 913 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 VN2R3P-201ENST00000422626 1412 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 MTCO1P18-201ENST00000455518 1419 ntBASIC4.95□□□□□ -1.62
USP41Q3LFD5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP41Q3LFD5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.95□□□□□ -1.62
USP41Q3LFD5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 CASC19-284ENST00000642142 1868 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC021146.4-201ENST00000309229 279 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 RNU4-44P-201ENST00000363050 141 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 MTATP6P31-201ENST00000406985 692 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 UBE2V1P9-201ENST00000414760 368 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 MTND4P11-201ENST00000417020 1058 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 TCEA1P2-201ENST00000420496 906 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 SFR1P2-201ENST00000421841 730 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 RGS17P1-201ENST00000423358 553 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 ETF1P3-201ENST00000430422 1160 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 SCARNA10-201ENST00000459255 330 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 NIP7P2-201ENST00000485801 544 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC008427.1-201ENST00000503102 655 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC093591.2-201ENST00000565254 3843 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC022884.3-201ENST00000579571 248 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 MIR548Y-201ENST00000582739 110 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 MIR4760-201ENST00000585040 80 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms