Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC96Q2M329 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC96Q2M329 RNF6P1-201ENST00000444889 1784 ntBASIC5.39□□□□□ -1.55
CCDC96Q2M329 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 CASC19-206ENST00000641028 1430 ntBASIC5.39□□□□□ -1.55
CCDC96Q2M329 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC96Q2M329 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC96Q2M329 SALL4P2-201ENST00000423288 2910 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC96Q2M329 LINC01355-201ENST00000566551 5444 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC021146.4-201ENST00000309229 279 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL080315.1-201ENST00000406055 466 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 MTND4P24-201ENST00000424002 397 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC016712.1-201ENST00000431088 378 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL035458.1-201ENST00000433096 585 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC073587.1-201ENST00000447093 876 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC092685.1-201ENST00000447960 1243 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 EIF2S2P5-201ENST00000457635 968 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 RN7SL860P-201ENST00000473738 223 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC96Q2M329 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC026979.4-201ENST00000606555 645 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AL133243.1-201ENST00000614487 366 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 MIR8069-1-201ENST00000616627 86 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC022106.2-201ENST00000620114 757 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 AC006249.1-201ENST00000621223 471 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 MIR8069-2-201ENST00000621412 86 ntBASIC5.38□□□□□ -1.55
CCDC96Q2M329 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC96Q2M329 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL359922.3-201ENST00000624779 1670 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC96Q2M329 HMGB1P10-201ENST00000395823 563 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL691517.1-201ENST00000440833 1235 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL353093.1-201ENST00000441292 436 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 XKRY2-201ENST00000442362 1093 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC013356.1-201ENST00000489027 564 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 HPRT1P1-201ENST00000509498 657 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 RN7SKP46-201ENST00000515942 234 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC106785.3-201ENST00000564064 847 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 OR4H6P-202ENST00000603819 340 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC010680.3-201ENST00000604215 520 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL158211.2-201ENST00000607282 395 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 MIR6798-201ENST00000612887 67 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC96Q2M329 U6.48-201ENST00000618523 106 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AP003072.4-201ENST00000624580 310 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC009452.1-201ENST00000640823 606 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL133268.1-201ENST00000405676 1401 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 AL353743.4-201ENST00000422653 1547 ntBASIC5.37□□□□□ -1.55
CCDC96Q2M329 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC96Q2M329 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC96Q2M329 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC96Q2M329 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC96Q2M329 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC96Q2M329 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC96Q2M329 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC96Q2M329 RN7SKP44-201ENST00000363602 316 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms