Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.17□□□□□ -1.58
UBE3AQ05086 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.17□□□□□ -1.58
UBE3AQ05086 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
UBE3AQ05086 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.17□□□□□ -1.58
UBE3AQ05086 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC022031.1-201ENST00000585985 2593 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC092162.3-201ENST00000624511 1624 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC005332.5-201ENST00000591222 2919 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 RNU6-236P-201ENST00000363886 106 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UBE3AQ05086 U3.22-201ENST00000391120 215 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 RNA5SP241-201ENST00000391326 114 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 MCTS2P-201ENST00000394552 546 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC106883.1-201ENST00000418805 562 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 USP9YP21-201ENST00000420603 432 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AL592293.2-201ENST00000422292 996 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 FABP7P1-201ENST00000424004 391 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC073143.1-201ENST00000436316 395 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC000111.2-201ENST00000448200 210 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 MTND2P28-201ENST00000457540 1044 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 RNU7-140P-201ENST00000459546 60 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 GTF2IP9-201ENST00000502460 301 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 UBE2V1P12-201ENST00000503954 474 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 RNU1-6P-201ENST00000516290 144 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 RN7SKP283-201ENST00000517197 270 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC104417.1-201ENST00000523974 751 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.16□□□□□ -1.58
UBE3AQ05086 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC133555.2-201ENST00000550213 292 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 MIR4509-3-201ENST00000578671 94 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 MIR4509-2-201ENST00000583920 94 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.16□□□□□ -1.58
UBE3AQ05086 RPL12P25-202ENST00000598100 674 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 MIR4509-1-201ENST00000618224 94 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC023510.2-201ENST00000622162 746 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 AL353743.4-201ENST00000422653 1547 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UBE3AQ05086 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 AL034370.1-201ENST00000397254 1590 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 SOCS5P3-201ENST00000425115 1576 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 AC091046.3-201ENST00000631455 1574 ntBASIC5.16□□□□□ -1.58
UBE3AQ05086 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.16□□□□□ -1.58
UBE3AQ05086 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBE3AQ05086 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.15□□□□□ -1.58
UBE3AQ05086 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3AQ05086 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3AQ05086 SMG1P6-201ENST00000532337 2930 ntBASIC5.15□□□□□ -1.58
UBE3AQ05086 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.15□□□□□ -1.58
UBE3AQ05086 PHKBP1-201ENST00000450951 1951 ntBASIC5.15□□□□□ -1.58
UBE3AQ05086 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3AQ05086 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UBE3AQ05086 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
UBE3AQ05086 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UBE3AQ05086 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 SNORA73.1-201ENST00000363107 205 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 RNU6-353P-201ENST00000364266 108 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UBE3AQ05086 RNU6-549P-201ENST00000384433 107 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 RNU6-178P-201ENST00000384631 104 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UBE3AQ05086 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.15□□□□□ -1.59
UBE3AQ05086 RNU2-6P-201ENST00000411404 190 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3AQ05086 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3AQ05086 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.15□□□□□ -1.59
UBE3AQ05086 GTF2IP2-201ENST00000424290 697 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 AC234779.1-201ENST00000425910 285 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 AP001324.1-201ENST00000428553 399 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3AQ05086 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.15□□□□□ -1.59
UBE3AQ05086 AC004854.1-201ENST00000440356 349 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 AC092809.1-201ENST00000441469 474 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 AC007537.2-201ENST00000472093 511 ntBASIC5.15□□□□□ -1.59
UBE3AQ05086 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.15□□□□□ -1.59
UBE3AQ05086 AC013356.1-201ENST00000489027 564 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms