Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC104118.1-201ENST00000607625 1589 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 BTBD10P1-201ENST00000549824 1352 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 TRGV6-201ENST00000417928 299 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 HMGB3P6-201ENST00000444896 598 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 RHEBP2-201ENST00000450289 600 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 SBDSP1-204ENST00000453858 737 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 RPS17P2-201ENST00000461663 408 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC091959.2-201ENST00000477363 321 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 MTCO3P35-201ENST00000485582 781 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC231760.1-201ENST00000498002 260 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC114322.1-201ENST00000506771 926 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 BRD9P1-201ENST00000529855 560 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 OR5D15P-201ENST00000531671 942 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC005868.1-201ENST00000536421 331 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN20P56880 AC009117.1-201ENST00000563948 554 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 CYCSP40-201ENST00000575927 294 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
CLDN20P56880 VN1R88P-201ENST00000596787 292 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AL035411.2-201ENST00000604022 421 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC023813.4-201ENST00000607580 580 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC087683.2-201ENST00000611384 326 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC139769.3-201ENST00000618383 175 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AL121895.2-201ENST00000619558 447 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
CLDN20P56880 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN20P56880 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN20P56880 AC108751.5-201ENST00000492880 1336 ntBASIC4.45□□□□□ -1.7
CLDN20P56880 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLDN20P56880 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC092079.1-201ENST00000558620 1985 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLDN20P56880 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLDN20P56880 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 RNU1-87P-201ENST00000363727 170 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 RNU4-68P-201ENST00000364314 141 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 SNORD116-12-201ENST00000384468 92 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL592291.1-201ENST00000403830 352 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 SNORA11C-201ENST00000408532 129 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 RNU4-22P-201ENST00000411058 166 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC016769.2-201ENST00000414815 475 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 FABP7P1-201ENST00000424004 391 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 GTF2IP2-201ENST00000424290 697 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 CKS1BP6-201ENST00000424932 240 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC093414.1-201ENST00000434712 514 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms