Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 IGBP1P5-201ENST00000507524 1000 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 AC010476.1-201ENST00000519111 851 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD13P35453 OR4A2P-201ENST00000527276 913 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD13P35453 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 AC084757.1-201ENST00000559987 490 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 AC090312.1-201ENST00000580637 348 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXD13P35453 AC011477.5-201ENST00000586571 259 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 RPL7P50-201ENST00000600588 727 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 AP002906.1-201ENST00000603405 233 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 AC097505.1-201ENST00000610199 565 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 AL138955.1-201ENST00000622881 1040 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXD13P35453 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD13P35453 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD13P35453 LINC00622-201ENST00000562811 1570 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 ZNF849P-201ENST00000594711 1566 ntBASIC4.98□□□□□ -1.61
HOXD13P35453 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HOXD13P35453 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXD13P35453 AC104446.1-201ENST00000613728 1321 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 DHX40P1-201ENST00000588725 1412 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC119744.1-201ENST00000454746 1715 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD13P35453 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD13P35453 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 Z98755.1-201ENST00000407015 1384 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXD13P35453 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 AC019155.1-201ENST00000382242 574 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 MIR195-201ENST00000385194 87 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 Z98745.1-201ENST00000402553 494 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AL139128.1-201ENST00000413921 941 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AL590139.1-201ENST00000416267 400 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
HOXD13P35453 AC009263.1-201ENST00000441193 1239 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC092809.1-201ENST00000441469 474 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 GEMIN8P3-201ENST00000445417 720 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD13P35453 RPS6P2-201ENST00000454208 705 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 RPS4XP6-201ENST00000477670 797 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD13P35453 DEFB109F-201ENST00000491870 277 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC137768.1-201ENST00000549998 553 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 MIR4443-201ENST00000585052 53 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 BPIFA4P-203ENST00000603168 689 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC010201.1-201ENST00000605051 540 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 SNORD91B-202ENST00000608459 222 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC005156.1-201ENST00000613371 573 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 AC140113.4-201ENST00000622087 222 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.97□□□□□ -1.61
HOXD13P35453 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXD13P35453 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 EOGT-210ENST00000615922 1931 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HOXD13P35453 AP001273.1-201ENST00000624493 3152 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD13P35453 AC007529.1-201ENST00000418574 2178 ntBASIC4.97□□□□□ -1.61
HOXD13P35453 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HOXD13P35453 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.96□□□□□ -1.61
HOXD13P35453 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HOXD13P35453 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXD13P35453 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
HOXD13P35453 AC108467.2-201ENST00000617640 1597 ntBASIC4.96□□□□□ -1.62
HOXD13P35453 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.96□□□□□ -1.62
HOXD13P35453 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXD13P35453 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXD13P35453 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXD13P35453 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms