Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.34□□□□□ -1.55
USP6P35125 HIGD1AP4-201ENST00000430194 280 ntBASIC5.34□□□□□ -1.55
USP6P35125 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.34□□□□□ -1.55
USP6P35125 AC006517.1-201ENST00000480485 328 ntBASIC5.34□□□□□ -1.55
USP6P35125 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.34□□□□□ -1.55
USP6P35125 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.34□□□□□ -1.55
USP6P35125 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.34□□□□□ -1.55
USP6P35125 AL159169.3-201ENST00000608871 561 ntBASIC5.34□□□□□ -1.55
USP6P35125 AC138627.1-204ENST00000641894 765 ntBASIC5.34□□□□□ -1.55
USP6P35125 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP6P35125 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
USP6P35125 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
USP6P35125 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.33□□□□□ -1.56
USP6P35125 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.33□□□□□ -1.56
USP6P35125 MIR34B-201ENST00000385076 84 ntBASIC5.33□□□□□ -1.56
USP6P35125 ATP5F1P4-201ENST00000397288 746 ntBASIC5.33□□□□□ -1.56
USP6P35125 SNORA81-201ENST00000408493 178 ntBASIC5.33□□□□□ -1.56
USP6P35125 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.33□□□□□ -1.56
USP6P35125 AC244033.1-201ENST00000426826 870 ntBASIC5.33□□□□□ -1.56
USP6P35125 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.33□□□□□ -1.56
USP6P35125 PDSS1P2-201ENST00000449397 678 ntBASIC5.33□□□□□ -1.56
USP6P35125 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.33□□□□□ -1.56
USP6P35125 RNU6-513P-201ENST00000516104 104 ntBASIC5.33□□□□□ -1.56
USP6P35125 SNORA70.24-201ENST00000517233 118 ntBASIC5.33□□□□□ -1.56
USP6P35125 SOD1P3-201ENST00000518682 454 ntBASIC5.33□□□□□ -1.56
USP6P35125 IGLV3-26-201ENST00000520756 302 ntBASIC5.33□□□□□ -1.56
USP6P35125 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.33□□□□□ -1.56
USP6P35125 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.33□□□□□ -1.56
USP6P35125 AC104662.1-201ENST00000604448 511 ntBASIC5.33□□□□□ -1.56
USP6P35125 AL391497.1-201ENST00000608671 547 ntBASIC5.33□□□□□ -1.56
USP6P35125 AL031666.3-201ENST00000609320 1006 ntBASIC5.33□□□□□ -1.56
USP6P35125 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 AC132825.8-201ENST00000640783 297 ntBASIC5.33□□□□□ -1.56
USP6P35125 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP6P35125 AC073346.2-201ENST00000624724 2058 ntBASIC5.33□□□□□ -1.56
USP6P35125 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP6P35125 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
USP6P35125 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.32□□□□□ -1.56
USP6P35125 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USP6P35125 TCEA1P2-201ENST00000420496 906 ntBASIC5.32□□□□□ -1.56
USP6P35125 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.32□□□□□ -1.56
USP6P35125 HMGN2P31-201ENST00000432430 273 ntBASIC5.32□□□□□ -1.56
USP6P35125 FTH1P25-201ENST00000447665 469 ntBASIC5.32□□□□□ -1.56
USP6P35125 SNORA59A-201ENST00000459326 152 ntBASIC5.32□□□□□ -1.56
USP6P35125 PLGLA-201ENST00000465668 449 ntBASIC5.32□□□□□ -1.56
USP6P35125 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.32□□□□□ -1.56
USP6P35125 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.32□□□□□ -1.56
USP6P35125 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.32□□□□□ -1.56
USP6P35125 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.32□□□□□ -1.56
USP6P35125 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.32□□□□□ -1.56
USP6P35125 AC015849.6-201ENST00000605454 474 ntBASIC5.32□□□□□ -1.56
USP6P35125 OR51C1P-201ENST00000608504 942 ntBASIC5.32□□□□□ -1.56
USP6P35125 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.32□□□□□ -1.56
USP6P35125 AC007342.8-201ENST00000623278 678 ntBASIC5.32□□□□□ -1.56
USP6P35125 AC124312.6-202ENST00000623624 418 ntBASIC5.32□□□□□ -1.56
USP6P35125 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.32□□□□□ -1.56
USP6P35125 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
USP6P35125 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
USP6P35125 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP6P35125 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.32□□□□□ -1.56
USP6P35125 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.31□□□□□ -1.56
USP6P35125 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.31□□□□□ -1.56
USP6P35125 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.31□□□□□ -1.56
USP6P35125 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.31□□□□□ -1.56
USP6P35125 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.31□□□□□ -1.56
USP6P35125 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.31□□□□□ -1.56
USP6P35125 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.31□□□□□ -1.56
USP6P35125 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.31□□□□□ -1.56
USP6P35125 VN1R92P-201ENST00000598511 928 ntBASIC5.31□□□□□ -1.56
USP6P35125 AC018816.2-201ENST00000621460 353 ntBASIC5.31□□□□□ -1.56
USP6P35125 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.31□□□□□ -1.56
USP6P35125 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP6P35125 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.31□□□□□ -1.56
USP6P35125 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
USP6P35125 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 AC126323.6-202ENST00000568092 3511 ntBASIC5.31□□□□□ -1.56
USP6P35125 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP6P35125 SNORD3H-201ENST00000384486 214 ntBASIC5.31□□□□□ -1.56
USP6P35125 MIR183-201ENST00000384958 110 ntBASIC5.31□□□□□ -1.56
USP6P35125 VDAC2P1-201ENST00000399358 958 ntBASIC5.31□□□□□ -1.56
USP6P35125 SNORA3.3-201ENST00000408712 125 ntBASIC5.31□□□□□ -1.56
USP6P35125 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.31□□□□□ -1.56
USP6P35125 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms